RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 ZNF569Q5MCW4 686 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 TRIM42Q8IWZ5 723 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
CDH4-201ENST00000543233 HINFPQ9BQA5 517 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
CDH4-201ENST00000543233 KCNJ14Q9UNX9 436 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDH4-201ENST00000543233 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 TACC3Q9Y6A5 838 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.4
CDH4-201ENST00000543233 GOLGA6BA6NDN3 693 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 OPLAHO14841 1288 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 KIF5CO60282 957 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 PAPOLAP51003 745 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 ZRSR2Q15696 482 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 KRT40Q6A162 431 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 BZW1Q7L1Q6 419 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 RUFY1Q96T51 708 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 RGL1Q9NZL6 768 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 EP400Q96L91 3159 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 RASSF9O75901 435 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 FMNL1O95466 1100 aaPredicted RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 ARHGAP22Q7Z5H3 698 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 LINC00301Q8NCQ3 95 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 YIPF2Q9BWQ6 316 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 PAPOLBQ9NRJ5 636 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 SRP68Q9UHB9 627 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 GUCY1A2P33402 732 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
CDH4-201ENST00000543233 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 FAM167BQ9BTA0 163 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
CDH4-201ENST00000543233 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 FGFR2P21802 821 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
CDH4-201ENST00000543233 FAM228AQ86W67 206 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 BICD1Q96G01 975 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 PLEKHG4BQ96PX9 1271 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 LGR5O75473 907 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
CDH4-201ENST00000543233 TRIM29Q14134 588 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
CDH4-201ENST00000543233 MYL1P05976 194 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 IMPDH2P12268 514 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 KLRK1P26718 216 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 ADKP55263 362 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 EVX2Q03828 476 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 ANO1Q5XXA6 986 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 TRIM58Q8NG06 486 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 MMADHCQ9H3L0 296 aaPredicted RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 NTSR2O95665 410 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 ENOX2Q16206 610 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 ARMC9Q7Z3E5 817 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 SYCP3Q8IZU3 236 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 MAB21L3Q8N8X9 362 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 HOOK2Q96ED9 719 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 FANCLQ9NW38 375 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 CTAGE9A4FU28 777 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 CWF19L1Q69YN2 538 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 NOC3LQ8WTT2 800 aaKnown RBP12.55□□□□□ -0.4
CDH4-201ENST00000543233 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
CDH4-201ENST00000543233 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms