RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 CALM1P0DP23 149 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 CALM2P0DP24 149 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 CALM3P0DP25 149 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 CYP2B6P20813 491 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 ADORA2AP29274 412 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 KIF5BP33176 963 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 UBXN2AP68543 259 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 BLOC1S2Q6QNY1 142 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 SYNE3Q6ZMZ3 975 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.53■□□□□ 0.24
DDX11-221ENST00000542661 DPP9Q86TI2 863 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 MMP19Q99542 508 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 SLC12A7Q9Y666 1083 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 ZNF236Q9UL36 1845 aa16.53■□□□□ 0.24
DDX11-221ENST00000542661 ZNF536O15090 1300 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 HMGCRP04035 888 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 ELNP15502 786 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 FGD1P98174 961 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
DDX11-221ENST00000542661 AGBL1Q96MI9 1066 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 UBA5Q9GZZ9 404 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
DDX11-221ENST00000542661 CCPG1Q9ULG6 757 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 RIPK3Q9Y572 518 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
DDX11-221ENST00000542661 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
DDX11-221ENST00000542661 GNAQP50148 359 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 ANAPC15P60006 121 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 SNAP25P60880 206 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
DDX11-221ENST00000542661 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 ACAD9Q9H845 621 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
DDX11-221ENST00000542661 INHAP05111 366 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 ALAS1P13196 640 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
DDX11-221ENST00000542661 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 TRAF1Q13077 416 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 DIS3Q9Y2L1 958 aaKnown RBP16.5■□□□□ 0.23
DDX11-221ENST00000542661 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
DDX11-221ENST00000542661 ZNFX1Q9P2E3 1918 aaKnown RBP16.5■□□□□ 0.23
DDX11-221ENST00000542661 PFASO15067 1338 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 CDC37Q16543 378 aaPredicted RBP16.49■□□□□ 0.23
DDX11-221ENST00000542661 MFSD14CQ5VZR4 134 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 TRIB2Q92519 343 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 TCEANC2Q96MN5 208 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
DDX11-221ENST00000542661 KIAA0100Q14667 2235 aaKnown RBP16.49■□□□□ 0.23
DDX11-221ENST00000542661 COBLO75128 1261 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 RCAN1P53805 252 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 MAF1Q9H063 256 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 RIOX1Q9H6W3 641 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
DDX11-221ENST00000542661 ZBTB5O15062 677 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 ZBTB43O43298 467 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 PGK2P07205 417 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 CCL5P13501 91 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 CPA1P15085 419 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 PPP2R5BQ15173 497 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 CCL14Q16627 93 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 Q6ZUG5 572 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 MSL3Q8N5Y2 521 aaKnown RBP16.47■□□□□ 0.23
DDX11-221ENST00000542661 NPLOC4Q8TAT6 608 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 SPZ1Q9BXG8 430 aa16.47■□□□□ 0.23
DDX11-221ENST00000542661 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
DDX11-221ENST00000542661 ABCB11O95342 1321 aa16.46■□□□□ 0.23
DDX11-221ENST00000542661 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
DDX11-221ENST00000542661 DNAJC25-GNG10A0A024R161 153 aa16.46■□□□□ 0.23
DDX11-221ENST00000542661 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms