RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 IL25Q9H293 177 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 ZMYND8Q9ULU4 1186 aaPredicted RBP19.34■□□□□ 0.69
CCND1-205ENST00000542367 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
CCND1-205ENST00000542367 ZNF865P0CJ78 1059 aaPredicted RBP19.33■□□□□ 0.68
CCND1-205ENST00000542367 SLC16A2P36021 539 aa19.33■□□□□ 0.68
CCND1-205ENST00000542367 MAMDC4Q6UXC1 1216 aa19.33■□□□□ 0.68
CCND1-205ENST00000542367 PRO3102Q9H379 93 aa19.33■□□□□ 0.68
CCND1-205ENST00000542367 ACAD9Q9H845 621 aa19.33■□□□□ 0.68
CCND1-205ENST00000542367 FRMPD2Q68DX3 1309 aaPredicted RBP19.32■□□□□ 0.68
CCND1-205ENST00000542367 SNAI1O95863 264 aaPredicted RBP19.32■□□□□ 0.68
CCND1-205ENST00000542367 ALAS1P13196 640 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 SYN1P17600 705 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 IMMTQ16891 758 aaKnown RBP19.32■□□□□ 0.68
CCND1-205ENST00000542367 BTNL9Q6UXG8 535 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 ZNF467Q7Z7K2 595 aaPredicted RBP19.32■□□□□ 0.68
CCND1-205ENST00000542367 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 RNF146Q9NTX7 359 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 CNPY2Q9Y2B0 182 aa19.32■□□□□ 0.68
CCND1-205ENST00000542367 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 KDM4AO75164 1064 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 RARBP10826 455 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 PDHBP11177 359 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 FXR1P51114 621 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCND1-205ENST00000542367 ATN1P54259 1190 aaPredicted RBP19.31■□□□□ 0.68
CCND1-205ENST00000542367 LRRC41Q15345 812 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 TKFCQ3LXA3 575 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 FGD4Q96M96 766 aa19.31■□□□□ 0.68
CCND1-205ENST00000542367 DNAH12Q6ZR08 3092 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 RANBP2P49792 3224 aaKnown RBP19.3■□□□□ 0.68
CCND1-205ENST00000542367 B4E1Z4 1266 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 AKR1A1P14550 325 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 IQCA1Q86XH1 822 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 DGKHQ86XP1 1220 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 RANBP17Q9H2T7 1088 aaKnown RBP19.3■□□□□ 0.68
CCND1-205ENST00000542367 A1CFQ9NQ94 594 aaKnown RBP19.3■□□□□ 0.68
CCND1-205ENST00000542367 XPNPEP3Q9NQH7 507 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 CCPG1Q9ULG6 757 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
CCND1-205ENST00000542367 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 CHMLP26374 656 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 NT5C2P49902 561 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 CNTN2Q02246 1040 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 MUM1L1Q5H9M0 696 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
CCND1-205ENST00000542367 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.29■□□□□ 0.68
CCND1-205ENST00000542367 PGK1P00558 417 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 ICAM1P05362 532 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 ADCYAP1R1P41586 468 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 ZNF543Q08ER8 600 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 FAM133AQ8N9E0 248 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 LENG1Q96BZ8 264 aaPredicted RBP19.28■□□□□ 0.68
CCND1-205ENST00000542367 GDF15Q99988 308 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 KRT23Q9C075 422 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 ZHX1Q9UKY1 873 aaPredicted RBP19.28■□□□□ 0.68
CCND1-205ENST00000542367 FAM184BQ9ULE4 1060 aa19.28■□□□□ 0.68
CCND1-205ENST00000542367 RAD50Q92878 1312 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 SLC39A5Q6ZMH5 540 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 ARMCX2Q7L311 632 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 RNF180Q86T96 592 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 ANKS1AQ92625 1134 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 FERMT2Q96AC1 680 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 ZSCAN10Q96SZ4 725 aaPredicted RBP19.27■□□□□ 0.68
CCND1-205ENST00000542367 ABHD16BQ9H3Z7 469 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 PCDH10Q9P2E7 1040 aa19.27■□□□□ 0.68
CCND1-205ENST00000542367 TRIOBPQ9H2D6 2365 aa19.27■□□□□ 0.67
CCND1-205ENST00000542367 SOWAHBA6NEL2 793 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 MAGEA10P43363 369 aaPredicted RBP19.26■□□□□ 0.67
CCND1-205ENST00000542367 RTP1P59025 263 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 PTH1RQ03431 593 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 NSMFQ6X4W1 530 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 PNMA1Q8ND90 353 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 KAT14Q9H8E8 782 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 CYP39A1Q9NYL5 469 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 MCM3APO60318 1980 aa19.26■□□□□ 0.67
CCND1-205ENST00000542367 BMP8BP34820 402 aa19.25■□□□□ 0.67
CCND1-205ENST00000542367 CCDC144BQ3MJ40 725 aa19.25■□□□□ 0.67
CCND1-205ENST00000542367 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
CCND1-205ENST00000542367 ENAHQ8N8S7 591 aaPredicted RBP19.25■□□□□ 0.67
CCND1-205ENST00000542367 PHF24Q9UPV7 400 aa19.25■□□□□ 0.67
CCND1-205ENST00000542367 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
CCND1-205ENST00000542367 A0A1W2PPC1 479 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 ASB14A6NK59 587 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 ADAMTS4O75173 837 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 DUSP11O75319 330 aaKnown RBP19.24■□□□□ 0.67
CCND1-205ENST00000542367 UBA5Q9GZZ9 404 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 KATNBL1Q9H079 304 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 TNKSO95271 1327 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 SYNRGQ9UMZ2 1314 aa19.24■□□□□ 0.67
CCND1-205ENST00000542367 NFIBO00712 420 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms