RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SHMT1P34896 483 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 ATP2B2Q01814 1243 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 PPP2R2DQ66LE6 453 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 ZNF444Q8N0Y2 327 aaPredicted RBP9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 LRRC47Q8N1G4 583 aaKnown RBP9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 ZNF274Q96GC6 653 aaPredicted RBP9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 CEP95Q96GE4 821 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
AC005840.3-201ENST00000541888 LTBP3Q9NS15 1303 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 STX6O43752 255 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 SLC3A2P08195 630 aaKnown RBP9□□□□□ -0.97
AC005840.3-201ENST00000541888 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
AC005840.3-201ENST00000541888 SART3Q15020 963 aaKnown RBP9□□□□□ -0.97
AC005840.3-201ENST00000541888 TNIP1Q15025 636 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 C9orf131Q5VYM1 1079 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
AC005840.3-201ENST00000541888 NBPF11Q86T75 865 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 IQCA1Q86XH1 822 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 STAG2Q8N3U4 1231 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 HDAC9Q9UKV0 1011 aa9□□□□□ -0.97
AC005840.3-201ENST00000541888 MYO3BQ8WXR4 1341 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 CPLX1O14810 134 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 EVCP57679 992 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 GABPAQ06546 454 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 MCTP1Q6DN14 999 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 SGMS1Q86VZ5 419 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 IDI2Q9BXS1 227 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 SLC26A6Q9BXS9 759 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 HACL1Q9UJ83 578 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 MYH15Q9Y2K3 1946 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 ATAD5Q96QE3 1844 aa8.99□□□□□ -0.97
AC005840.3-201ENST00000541888 BRD1O95696 1058 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 HLA-DOAP06340 250 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 LIFRP42702 1097 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 HDLBPQ00341 1268 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 PRKG1Q13976 671 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 NTRK3Q16288 839 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 RTN1Q16799 776 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 KIF4BQ2VIQ3 1234 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 TTC6Q86TZ1 520 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 FAM184AQ8NB25 1140 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 TMEM47Q9BQJ4 181 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 FTOQ9C0B1 505 aaKnown RBP eCLIP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 RRAGDQ9NQL2 400 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 ISY1Q9ULR0 285 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 FRMPD2Q68DX3 1309 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 BAG4O95429 457 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 NCLP19338 710 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 TROAPQ12815 778 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 DGKZQ13574 1117 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 SEPT2Q15019 361 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 TMED8Q6PL24 325 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 USP17L2Q6R6M4 530 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 FANCBQ8NB91 859 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 SMARCC2Q8TAQ2 1214 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 SHISA4Q96DD7 197 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 VPS33BQ9H267 617 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 TMOD2Q9NZR1 351 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 ORC3Q9UBD5 711 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 CLIP2Q9UDT6 1046 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 CNPY2Q9Y2B0 182 aa8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 GREB1LQ9C091 1923 aaPredicted RBP8.98□□□□□ -0.97
AC005840.3-201ENST00000541888 CENPFP49454 3210 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 ADAMTS3O15072 1205 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 ZSCAN22P10073 491 aaPredicted RBP8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 CEBPZQ03701 1054 aaKnown RBP8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 RASA3Q14644 834 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 SLC35G1Q2M3R5 365 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 SYNE3Q6ZMZ3 975 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 CATIPQ7Z7H3 387 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 FBXL16Q8N461 479 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 KAT14Q9H8E8 782 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 GGA3Q9NZ52 723 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 PI4KBQ9UBF8 816 aa8.97□□□□□ -0.97
AC005840.3-201ENST00000541888 SMCHD1A6NHR9 2005 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 USP17L5A8MUK1 530 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 H3BQV1 296 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 MYO1BO43795 1136 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 F13A1P00488 732 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 GH2P01242 217 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 MCM4P33991 863 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 NUCB2P80303 420 aa8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.97
AC005840.3-201ENST00000541888 SRBD1Q8N5C6 995 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms