RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 PRDX5P30044 214 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
LMO3-226ENST00000541589 GSTO1P78417 241 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 NFIAQ12857 509 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 LRRC26Q2I0M4 334 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
LMO3-226ENST00000541589 CHST3Q7LGC8 479 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 SCYL3Q8IZE3 742 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 ANKRD13CQ8N6S4 541 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 FOXD4L4Q8WXT5 416 aaPredicted RBP9.51□□□□□ -0.89
LMO3-226ENST00000541589 TMEM87BQ96K49 555 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 KRT23Q9C075 422 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
LMO3-226ENST00000541589 ANAPC4Q9UJX5 808 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 MTMR6Q9Y217 621 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 DYNLL1P63167 89 aaKnown RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 HMGN5P82970 282 aaKnown RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 MAP3K10Q02779 954 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 PPARAQ07869 468 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 TCP10Q12799 353 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 PTGDRQ13258 359 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 LARP1BQ659C4 914 aaKnown RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 CDC42EP5Q6NZY7 148 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 MFSD6Q6ZSS7 791 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 DZIP1Q86YF9 867 aaKnown RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 MTA3Q9BTC8 594 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
LMO3-226ENST00000541589 SEMA6BQ9H3T3 888 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 LMBRD1Q9NUN5 540 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 RAPGEFL1Q9UHV5 662 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 AGTPBP1Q9UPW5 1226 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 NEDD4P46934 1319 aa9.5□□□□□ -0.89
LMO3-226ENST00000541589 KLF18A0A0U1RQI7 1052 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 B4E1Z4 1266 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 SH2B2O14492 632 aaPredicted RBP9.49□□□□□ -0.89
LMO3-226ENST00000541589 DHX16O60231 1041 aaKnown RBP9.49□□□□□ -0.89
LMO3-226ENST00000541589 LDHCP07864 332 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 PCP11498 1178 aaKnown RBP9.49□□□□□ -0.89
LMO3-226ENST00000541589 DEKP35659 375 aaKnown RBP9.49□□□□□ -0.89
LMO3-226ENST00000541589 PLA2G5P39877 138 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 KLHL40Q2TBA0 621 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 CYB5R4Q7L1T6 521 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 ZFPM1Q8IX07 1006 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
LMO3-226ENST00000541589 SDR42E1Q8WUS8 393 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 TRIB2Q92519 343 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 ATP8A2Q9NTI2 1148 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
LMO3-226ENST00000541589 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
LMO3-226ENST00000541589 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 JAK2O60674 1132 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
LMO3-226ENST00000541589 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 AATFQ9NY61 560 aaKnown RBP eCLIP9.48□□□□□ -0.89
LMO3-226ENST00000541589 BRPF3Q9ULD4 1205 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 NAP1L2Q9ULW6 460 aaPredicted RBP9.48□□□□□ -0.89
LMO3-226ENST00000541589 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 PTPRFP10586 1907 aa9.48□□□□□ -0.89
LMO3-226ENST00000541589 MROH7-TTC4A0A0A0MT08 1334 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 KDM4AO75164 1064 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 CTDNEP1O95476 244 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 BAG3O95817 575 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 LIFRP42702 1097 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 PPP4CP60510 307 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 SART3Q15020 963 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 SBK1Q52WX2 424 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TREML2Q5T2D2 321 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 SGMS1Q86VZ5 419 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 MYLIPQ8WY64 445 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 NOL10Q9BSC4 688 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 TTYH1Q9H313 450 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 DDX49Q9Y6V7 483 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 MINDY4BA8MYZ0 360 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 IFIT3O14879 490 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 MBD3O95983 291 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms