RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PCSK9Q8NBP7 692 aaKnown RBP14.23□□□□□ -0.13
COPA-205ENST00000541366 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.23□□□□□ -0.13
COPA-205ENST00000541366 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
COPA-205ENST00000541366 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
COPA-205ENST00000541366 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.22□□□□□ -0.13
COPA-205ENST00000541366 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
COPA-205ENST00000541366 RLBP1P12271 317 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 TTF1Q15361 905 aaPredicted RBP14.22□□□□□ -0.13
COPA-205ENST00000541366 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
COPA-205ENST00000541366 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
COPA-205ENST00000541366 ASTN1O14525 1302 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 COPB2P35606 906 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 PPP2R2DQ66LE6 453 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 ITPRIPQ8IWB1 547 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 VWCEQ96DN2 955 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 C1QTNF1Q9BXJ1 281 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 SPC25Q9HBM1 224 aa14.21□□□□□ -0.13
COPA-205ENST00000541366 RAVER2Q9HCJ3 691 aaKnown RBP14.21□□□□□ -0.13
COPA-205ENST00000541366 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
COPA-205ENST00000541366 GRIN2DO15399 1336 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 CNTN2Q02246 1040 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
COPA-205ENST00000541366 KRT40Q6A162 431 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 SCLYQ96I15 445 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 KATNBL1Q9H079 304 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 WNT8AQ9H1J5 351 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
COPA-205ENST00000541366 ABHD16BQ9H3Z7 469 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 CERS4Q9HA82 394 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
COPA-205ENST00000541366 NDUFB10O96000 172 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 ADD2P35612 726 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 TMEM63BQ5T3F8 832 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
COPA-205ENST00000541366 ANKRD35Q8N283 1001 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 RHPN1Q8TCX5 695 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 NOC4LQ9BVI4 516 aaKnown RBP14.19□□□□□ -0.14
COPA-205ENST00000541366 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
COPA-205ENST00000541366 GREB1LQ9C091 1923 aaPredicted RBP14.18□□□□□ -0.14
COPA-205ENST00000541366 EPOPA6NHQ4 379 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 ZBBXA8MT70 800 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 F5H6K3 240 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 B4GALT4O60513 344 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 PSMC6P62333 389 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 KLRC3Q07444 240 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
COPA-205ENST00000541366 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
COPA-205ENST00000541366 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.144e-13■■□□□ 12.7
COPA-205ENST00000541366 KIFC2Q96AC6 838 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
COPA-205ENST00000541366 HOMER2Q9NSB8 354 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 MTCH2Q9Y6C9 303 aa14.18□□□□□ -0.14
COPA-205ENST00000541366 ERC2O15083 957 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 ZBED4O75132 1171 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 ARHGEF15O94989 841 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 TNFAIP2Q03169 654 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
COPA-205ENST00000541366 BOLA2Q9H3K6 86 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 PAG1Q9NWQ8 432 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 PCDHA11Q9Y5I1 949 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 SLC4A4Q9Y6R1 1079 aa14.17□□□□□ -0.14
COPA-205ENST00000541366 BRWD1Q9NSI6 2320 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 MUC6Q6W4X9 2439 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 SCN5AQ14524 2016 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 FAM86C2PA6NEL3 165 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 ATP2A1O14983 1001 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 CA3P07451 260 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
COPA-205ENST00000541366 RASA1P20936 1047 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 NKX3-2P78367 333 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 AMOTL1Q8IY63 956 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
COPA-205ENST00000541366 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 GNEQ9Y223 722 aaKnown RBP14.16□□□□□ -0.14
COPA-205ENST00000541366 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
COPA-205ENST00000541366 PIEZO1Q92508 2521 aa14.16□□□□□ -0.14
COPA-205ENST00000541366 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 SOWAHBA6NEL2 793 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 RBAK-RBAKDNI3L0D1 243 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 DYNC1LI2O43237 492 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms