RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 ERICH2A1L162 156 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 GNG11P61952 73 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 SLC20A2Q08357 652 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 GPS2Q13227 327 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 DGKZQ13574 1117 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 TNIP1Q15025 636 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 HHIPL2Q6UWX4 724 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 SECISBP2LQ93073 1101 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 CPVLQ9H3G5 476 aa16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 PUF60Q9UHX1 559 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-210ENST00000541286 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 PPP4CP60510 307 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 EP400NLQ6ZTU2 488 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 L2HGDHQ9H9P8 463 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 CABP5Q9NP86 173 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 GGA3Q9NZ52 723 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 NFE2L3Q9Y4A8 694 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 ETF1P62495 437 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 ATP2B2Q01814 1243 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 C12orf60Q5U649 245 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 WDR24Q96S15 920 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 ADM5C9JUS6 153 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 MOB2Q70IA6 237 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 PARD6BQ9BYG5 372 aa16.19■□□□□ 0.18
SFSWAP-210ENST00000541286 LTBP3Q9NS15 1303 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 LAMA4Q16363 1823 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 KIF2AO00139 706 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 CBFA2T2O43439 604 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 RASA3Q14644 834 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 DHX58Q96C10 678 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 PCDHB6Q9Y5E3 794 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 MPHOSPH10O00566 681 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 CASQ1P31415 396 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 NOP2P46087 812 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 WTAPQ15007 396 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 RTN1Q16799 776 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 CC2D1AQ6P1N0 951 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 OXER1Q8TDS5 423 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 PDE11AQ9HCR9 933 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 NMRK2Q9NPI5 230 aa16.18■□□□□ 0.18
SFSWAP-210ENST00000541286 PTPAQ15257 358 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 NBPF12Q5TAG4 269 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 MKNK2Q9HBH9 465 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 TFAP4Q01664 338 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 AGBL3Q8NEM8 1001 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 SAMSN1Q9NSI8 373 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 POTECB2RU33 542 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 CDK8P49336 464 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 SMYD4Q8IYR2 804 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 ATP8A2Q9NTI2 1148 aa16.17■□□□□ 0.18
SFSWAP-210ENST00000541286 AKR1B1P15121 316 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 BMP6P22004 513 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 GPC2Q8N158 579 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 HINFPQ9BQA5 517 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 LZTFL1Q9NQ48 299 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 FAM217BQ9NTX9 383 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 TADA3O75528 432 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 GNAT2P19087 354 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 POSTNQ15063 836 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 ARFGAP3Q9NP61 516 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
SFSWAP-210ENST00000541286 CUTAO60888 179 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 SRLQ86TD4 932 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 PACS2Q86VP3 889 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 BAG1Q99933 345 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 TSPYL1Q9H0U9 437 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 MYH1P12882 1939 aa16.15■□□□□ 0.18
SFSWAP-210ENST00000541286 TSPY2A6NKD2 308 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms