RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SLC16A2P36021 539 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 OAZ1P54368 228 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 TTC14Q96N46 770 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 TINF2Q9BSI4 451 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
LTBR-209ENST00000541102 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
LTBR-209ENST00000541102 B4E1Z4 1266 aa16.7■□□□□ 0.26
LTBR-209ENST00000541102 MSCO60682 206 aa16.7■□□□□ 0.26
LTBR-209ENST00000541102 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
LTBR-209ENST00000541102 CHST13Q8NET6 341 aa16.7■□□□□ 0.26
LTBR-209ENST00000541102 FBXO40Q9UH90 709 aa16.7■□□□□ 0.26
LTBR-209ENST00000541102 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
LTBR-209ENST00000541102 SLC27A2O14975 620 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 SEPT4O43236 478 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 ALAS1P13196 640 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 ZNF536O15090 1300 aa16.69■□□□□ 0.26
LTBR-209ENST00000541102 PDHBP11177 359 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
LTBR-209ENST00000541102 CCDC178Q5BJE1 867 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 SYDE2Q5VT97 1194 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 IQCA1Q86XH1 822 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 DGKHQ86XP1 1220 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 ZSCAN10Q96SZ4 725 aaPredicted RBP16.68■□□□□ 0.26
LTBR-209ENST00000541102 KRT23Q9C075 422 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 ACAD9Q9H845 621 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
LTBR-209ENST00000541102 DNAJC25-GNG10A0A024R161 153 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 E7EWF7 191 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 TKFCQ3LXA3 575 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 GJC2Q5T442 439 aaPredicted RBP16.67■□□□□ 0.26
LTBR-209ENST00000541102 BTNL9Q6UXG8 535 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 C7orf61Q8IZ16 206 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 SENP6Q9GZR1 1112 aaPredicted RBP16.67■□□□□ 0.26
LTBR-209ENST00000541102 CCPG1Q9ULG6 757 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 COLQQ9Y215 455 aaPredicted RBP16.67■□□□□ 0.26
LTBR-209ENST00000541102 CNPY2Q9Y2B0 182 aa16.67■□□□□ 0.26
LTBR-209ENST00000541102 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 COL6A1P12109 1028 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 NT5C2P49902 561 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 CHRDL2Q6WN34 429 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 ARRDC4Q8NCT1 418 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 PFASO15067 1338 aa16.66■□□□□ 0.26
LTBR-209ENST00000541102 SNAI1O95863 264 aaPredicted RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 MUM1L1Q5H9M0 696 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 ENAHQ8N8S7 591 aaPredicted RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 PNMA1Q8ND90 353 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 ANKS1AQ92625 1134 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 ZMYND8Q9ULU4 1186 aaPredicted RBP16.65■□□□□ 0.26
LTBR-209ENST00000541102 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
LTBR-209ENST00000541102 DNM1LO00429 736 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 REC8O95072 547 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 ICAM1P05362 532 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 ZNF865P0CJ78 1059 aaPredicted RBP16.64■□□□□ 0.25
LTBR-209ENST00000541102 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 RARBP10826 455 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 HSPA4P34932 840 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
LTBR-209ENST00000541102 TRDNQ13061 729 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 ADCK5Q3MIX3 580 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.64■□□□□ 0.25
LTBR-209ENST00000541102 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
LTBR-209ENST00000541102 UBA5Q9GZZ9 404 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
LTBR-209ENST00000541102 TNKSO95271 1327 aa16.64■□□□□ 0.25
LTBR-209ENST00000541102 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 ANTXR2P58335 489 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 LRRC26Q2I0M4 334 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
LTBR-209ENST00000541102 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 KCNB2Q92953 911 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
LTBR-209ENST00000541102 FGD4Q96M96 766 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 XPNPEP3Q9NQH7 507 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms