RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SLC16A2P36021 539 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 NOVP48745 357 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 NUCB1Q02818 461 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 RCSD1Q6JBY9 416 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 MAMDC4Q6UXC1 1216 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 FAM160B2Q86V87 743 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 TBC1D10CQ8IV04 446 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-209ENST00000540804 PRR12Q9ULL5 1215 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 SYNRGQ9UMZ2 1314 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 TRIM43BA6NCK2 446 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 ALAS1P13196 640 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 SDSP20132 328 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 PTGS1P23219 599 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 OAZ1P54368 228 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 SNX17Q15036 470 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 LRIT3Q3SXY7 679 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 RNF180Q86T96 592 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
MSRB3-209ENST00000540804 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
MSRB3-209ENST00000540804 LBHD1Q9BQE6 289 aaPredicted RBP17.12■□□□□ 0.33
MSRB3-209ENST00000540804 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
MSRB3-209ENST00000540804 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 FAM184BQ9ULE4 1060 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
MSRB3-209ENST00000540804 SYNGAP1Q96PV0 1343 aa17.12■□□□□ 0.33
MSRB3-209ENST00000540804 ZNFX1Q9P2E3 1918 aaKnown RBP17.11■□□□□ 0.33
MSRB3-209ENST00000540804 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
MSRB3-209ENST00000540804 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 ITGB8P26012 769 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 TLE2Q04725 743 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
MSRB3-209ENST00000540804 ARMCX2Q7L311 632 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
MSRB3-209ENST00000540804 BADQ92934 168 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 ASTN1O14525 1302 aa17.11■□□□□ 0.33
MSRB3-209ENST00000540804 PLXNA1Q9UIW2 1896 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.1■□□□□ 0.33
MSRB3-209ENST00000540804 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
MSRB3-209ENST00000540804 FAM133AQ8N9E0 248 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 KATNBL1Q9H079 304 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
MSRB3-209ENST00000540804 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
MSRB3-209ENST00000540804 PLA2G6O60733 806 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 ACLYP53396 1101 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
MSRB3-209ENST00000540804 AAMPQ13685 434 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 KCNA10Q16322 511 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 C9orf50Q5SZB4 431 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 TMEM63BQ5T3F8 832 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 CCSAPQ6IQ19 270 aaPredicted RBP17.09■□□□□ 0.33
MSRB3-209ENST00000540804 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
MSRB3-209ENST00000540804 KLHDC9Q8NEP7 349 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 OSBPL3Q9H4L5 887 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 NEDD4P46934 1319 aa17.09■□□□□ 0.33
MSRB3-209ENST00000540804 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
MSRB3-209ENST00000540804 FDX1P10109 184 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 TOP1P11387 765 aaKnown RBP17.08■□□□□ 0.32
MSRB3-209ENST00000540804 SHHQ15465 462 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 DEFB123Q8N688 67 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 IL25Q9H293 177 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
MSRB3-209ENST00000540804 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 DUSP11O75319 330 aaKnown RBP17.07■□□□□ 0.32
MSRB3-209ENST00000540804 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
MSRB3-209ENST00000540804 PDE4AP27815 886 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 C1orf53Q5VUE5 145 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 EEPD1Q7L9B9 569 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
MSRB3-209ENST00000540804 ABHD16BQ9H3Z7 469 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
MSRB3-209ENST00000540804 CTAGE5O15320 804 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 EPHB4P54760 987 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 BEX3Q00994 111 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms