RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 TBC1D16Q8TBP0 767 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 PCDHA4Q9UN74 947 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 AKT3Q9Y243 479 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 ESPNB1AK53 854 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 GSPT1P15170 499 aaKnown RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 PRDX5P30044 214 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 MCAMP43121 646 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 MFSD14CQ5VZR4 134 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 SEPT9Q9UHD8 586 aaPredicted RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 CACNB3P54284 484 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 CCDC14Q49A88 953 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 APOA5Q6Q788 366 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 TMCO3Q6UWJ1 677 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 PUS7LQ9H0K6 701 aaKnown RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 K7ENM7 598 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 SLC16A2P36021 539 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 CDC37Q16543 378 aaPredicted RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 GNAT1P11488 350 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 KIAA1524Q8TCG1 905 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 OSBP2Q969R2 916 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 NUP58Q9BVL2 599 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 SYNRGQ9UMZ2 1314 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 GIMAP8Q8ND71 665 aaPredicted RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 NACC1Q96RE7 527 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 RIOK1Q9BRS2 568 aaKnown RBP15.78■□□□□ 0.12
COLCA1-204ENST00000540738 MAGEF1Q9HAY2 307 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 TBC1D7Q9P0N9 293 aa15.78■□□□□ 0.12
COLCA1-204ENST00000540738 FER1L4A9Z1Z3 1794 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 ME3Q16798 604 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 RNF207Q6ZRF8 634 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 DAPK3O43293 454 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 DPEP1P16444 411 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 POSTNQ15063 836 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 IPO4Q8TEX9 1081 aaKnown RBP15.77■□□□□ 0.12
COLCA1-204ENST00000540738 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 USP42Q9H9J4 1324 aaKnown RBP15.77■□□□□ 0.12
COLCA1-204ENST00000540738 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
COLCA1-204ENST00000540738 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
COLCA1-204ENST00000540738 ABCC12Q96J65 1359 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 LONP1P36776 959 aaKnown RBP15.77■□□□□ 0.11
COLCA1-204ENST00000540738 PIGSQ96S52 555 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 ZNF202O95125 648 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 TUBB4AP04350 444 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.11
COLCA1-204ENST00000540738 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.11
COLCA1-204ENST00000540738 CCDC77Q9BR77 488 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 NUB1Q9Y5A7 615 aa15.77■□□□□ 0.11
COLCA1-204ENST00000540738 LMNB1P20700 586 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 CCDC84Q86UT8 332 aaPredicted RBP15.76■□□□□ 0.11
COLCA1-204ENST00000540738 MYOCDQ8IZQ8 938 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 NSMCE1Q8WV22 266 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 PREX1Q8TCU6 1659 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 UTYO14607 1347 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
COLCA1-204ENST00000540738 PSAPP07602 524 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 RBM46Q8TBY0 533 aaKnown RBP15.76■□□□□ 0.11
COLCA1-204ENST00000540738 STRBPQ96SI9 672 aaKnown RBP15.76■□□□□ 0.11
COLCA1-204ENST00000540738 PSMD1Q99460 953 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 TSGA10Q9BZW7 698 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 KIAA0754O94854 1291 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 TGFB2P61812 414 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 MIS12Q9H081 205 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 IQCDQ96DY2 449 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
COLCA1-204ENST00000540738 KRT9P35527 623 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 ASIC2Q16515 512 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 LSG1Q9H089 658 aaKnown RBP15.75■□□□□ 0.11
COLCA1-204ENST00000540738 KCNH4Q9UQ05 1017 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 SPP2Q13103 211 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 EPHA10Q5JZY3 1008 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 CYP21A2P08686 494 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 LIFRP42702 1097 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 STIM2Q9P246 746 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 MST1RQ04912 1400 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 AK8Q96MA6 479 aa15.75■□□□□ 0.11
COLCA1-204ENST00000540738 FOXP1Q9H334 677 aaPredicted RBP15.75■□□□□ 0.11
COLCA1-204ENST00000540738 TLR3O15455 904 aaKnown RBP15.74■□□□□ 0.11
COLCA1-204ENST00000540738 STAMBPO95630 424 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 SEL1L2Q5TEA6 688 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 GTF3C2Q8WUA4 911 aaPredicted RBP15.74■□□□□ 0.11
COLCA1-204ENST00000540738 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 MAPK8IP1Q9UQF2 711 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 STK10O94804 968 aaKnown RBP15.74■□□□□ 0.11
COLCA1-204ENST00000540738 MYCP01106 439 aaPredicted RBP15.74■□□□□ 0.11
COLCA1-204ENST00000540738 ITPK1Q13572 414 aa15.74■□□□□ 0.11
COLCA1-204ENST00000540738 STXBP2Q15833 593 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms