RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 CCSAPQ6IQ19 270 aaPredicted RBP22.85■■□□□ 1.25
SOD2-212ENST00000540491 GUCD1Q96NT3 240 aa22.85■■□□□ 1.25
SOD2-212ENST00000540491 ACAD9Q9H845 621 aa22.85■■□□□ 1.25
SOD2-212ENST00000540491 PLXNA1Q9UIW2 1896 aa22.85■■□□□ 1.25
SOD2-212ENST00000540491 TMEM232C9JQI7 657 aa22.84■■□□□ 1.25
SOD2-212ENST00000540491 PQBP1O60828 265 aaKnown RBP22.84■■□□□ 1.25
SOD2-212ENST00000540491 SLC1A4P43007 532 aa22.84■■□□□ 1.25
SOD2-212ENST00000540491 SLC4A3P48751 1232 aa22.84■■□□□ 1.25
SOD2-212ENST00000540491 NKX3-2P78367 333 aa22.84■■□□□ 1.25
SOD2-212ENST00000540491 KCNA10Q16322 511 aa22.84■■□□□ 1.25
SOD2-212ENST00000540491 LRRC47Q8N1G4 583 aaKnown RBP22.84■■□□□ 1.25
SOD2-212ENST00000540491 UPF3AQ9H1J1 476 aaKnown RBP22.84■■□□□ 1.25
SOD2-212ENST00000540491 GJA9P57773 515 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 FPGSQ05932 587 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 CCDC174Q6PII3 467 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 ARMCX2Q7L311 632 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 SEC62Q99442 399 aaKnown RBP22.83■■□□□ 1.25
SOD2-212ENST00000540491 SEZ6LQ9BYH1 1024 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 PCDHB15Q9Y5E8 787 aa22.83■■□□□ 1.25
SOD2-212ENST00000540491 LAMA2P24043 3122 aaKnown RBP22.82■■□□□ 1.24
SOD2-212ENST00000540491 ASB14A6NK59 587 aa22.82■■□□□ 1.24
SOD2-212ENST00000540491 TSPY2A6NKD2 308 aa22.82■■□□□ 1.24
SOD2-212ENST00000540491 FAAP100Q0VG06 881 aa22.82■■□□□ 1.24
SOD2-212ENST00000540491 CCDC144BQ3MJ40 725 aa22.82■■□□□ 1.24
SOD2-212ENST00000540491 ANAPC4Q9UJX5 808 aa22.82■■□□□ 1.24
SOD2-212ENST00000540491 C6orf222P0C671 652 aaPredicted RBP22.81■■□□□ 1.24
SOD2-212ENST00000540491 IKQ13123 557 aaPredicted RBP22.81■■□□□ 1.24
SOD2-212ENST00000540491 RCSD1Q6JBY9 416 aa22.81■■□□□ 1.24
SOD2-212ENST00000540491 FAM133AQ8N9E0 248 aa22.81■■□□□ 1.24
SOD2-212ENST00000540491 EVI5LQ96CN4 794 aa22.81■■□□□ 1.24
SOD2-212ENST00000540491 RNPC3Q96LT9 517 aaKnown RBP22.81■■□□□ 1.24
SOD2-212ENST00000540491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
SOD2-212ENST00000540491 TIMP1P01033 207 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 ASGR1P07306 291 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 ITGB8P26012 769 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 CDK7P50613 346 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 GNASQ5JWF2 1037 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 CCDC129Q6ZRS4 1044 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 CCDC144CPQ8IYA2 1237 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
SOD2-212ENST00000540491 FGD4Q96M96 766 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 ISY1Q9ULR0 285 aaKnown RBP22.8■■□□□ 1.24
SOD2-212ENST00000540491 STX8Q9UNK0 236 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 CUL9Q8IWT3 2517 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 MYH4Q9Y623 1939 aa22.8■■□□□ 1.24
SOD2-212ENST00000540491 A0A0U1RQG5 324 aaPredicted RBP22.79■■□□□ 1.24
SOD2-212ENST00000540491 CABYRO75952 493 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 MCCP23508 829 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 NOVP48745 357 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 ALX1Q15699 326 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.79■■□□□ 1.24
SOD2-212ENST00000540491 FAM161BQ96MY7 647 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 CDX2Q99626 313 aaPredicted RBP22.79■■□□□ 1.24
SOD2-212ENST00000540491 A1CFQ9NQ94 594 aaKnown RBP22.79■■□□□ 1.24
SOD2-212ENST00000540491 HELLSQ9NRZ9 838 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 RNF146Q9NTX7 359 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 TBX21Q9UL17 535 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 PNMA2Q9UL42 364 aa22.79■■□□□ 1.24
SOD2-212ENST00000540491 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.78■■□□□ 1.24
SOD2-212ENST00000540491 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.78■■□□□ 1.24
SOD2-212ENST00000540491 ARVCFO00192 962 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 TLR3O15455 904 aaKnown RBP22.78■■□□□ 1.24
SOD2-212ENST00000540491 ORC4O43929 436 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 VTI1AQ96AJ9 217 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 TRERF1Q96PN7 1200 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 KATNBL1Q9H079 304 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 HOMER2Q9NSB8 354 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 Q9Y3F1 56 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 ZNF536O15090 1300 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 SALL3Q9BXA9 1300 aa22.78■■□□□ 1.24
SOD2-212ENST00000540491 LOC102724159A0A0B4J2E5 919 aa22.77■■□□□ 1.24
SOD2-212ENST00000540491 ZEB2O60315 1214 aa22.77■■□□□ 1.24
SOD2-212ENST00000540491 FGRP09769 529 aa22.77■■□□□ 1.24
SOD2-212ENST00000540491 TNFAIP2Q03169 654 aa22.77■■□□□ 1.24
SOD2-212ENST00000540491 PPIGQ13427 754 aaKnown RBP eCLIP22.77■■□□□ 1.242e-15■■□□□ 14
SOD2-212ENST00000540491 PWP2Q15269 919 aaKnown RBP22.77■■□□□ 1.24
SOD2-212ENST00000540491 OTUD7AQ8TE49 926 aaPredicted RBP22.77■■□□□ 1.24
SOD2-212ENST00000540491 TMEM199Q8N511 208 aa22.76■■□□□ 1.23
SOD2-212ENST00000540491 DCAF4Q8WV16 495 aa22.76■■□□□ 1.23
SOD2-212ENST00000540491 AGBL1Q96MI9 1066 aa22.76■■□□□ 1.23
SOD2-212ENST00000540491 IL17RBQ9NRM6 502 aa22.76■■□□□ 1.23
SOD2-212ENST00000540491 MYADML2A6NDP7 307 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 RANBP6O60518 1105 aaKnown RBP22.75■■□□□ 1.23
SOD2-212ENST00000540491 PCP11498 1178 aaKnown RBP22.75■■□□□ 1.23
SOD2-212ENST00000540491 ALAS1P13196 640 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 CNTN2Q02246 1040 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 AAMPQ13685 434 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 ANKRD45Q5TZF3 282 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 IQSEC1Q6DN90 963 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 TCP11L1Q9NUJ3 509 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 PRR12Q9ULL5 1215 aa22.75■■□□□ 1.23
SOD2-212ENST00000540491 FOXP2O15409 715 aa22.74■■□□□ 1.23
SOD2-212ENST00000540491 ADCY6O43306 1168 aa22.74■■□□□ 1.23
SOD2-212ENST00000540491 ICAM1P05362 532 aa22.74■■□□□ 1.23
SOD2-212ENST00000540491 NT5C2P49902 561 aa22.74■■□□□ 1.23
SOD2-212ENST00000540491 EPHB4P54760 987 aa22.74■■□□□ 1.23
SOD2-212ENST00000540491 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
SOD2-212ENST00000540491 KCTD1Q719H9 257 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms