RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 ANKRD33Q7Z3H0 272 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 MAFAQ8NHW3 353 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 TMEM232C9JQI7 657 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 DUSP11O75319 330 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 ASGR1P07306 291 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 TFAP4Q01664 338 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 KATNBL1Q9H079 304 aa16.96■□□□□ 0.31
SEMA4D-222ENST00000540183 ZNF536O15090 1300 aa16.96■□□□□ 0.3
SEMA4D-222ENST00000540183 SPTBN5Q9NRC6 3674 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 DCDC2CA8MYV0 355 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 CTAGE5O15320 804 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 FOXP2O15409 715 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 NMT2O60551 498 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 BEX3Q00994 111 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 PPARAQ07869 468 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 CCDC144CPQ8IYA2 1237 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 UPF3AQ9H1J1 476 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 TBX21Q9UL17 535 aa16.95■□□□□ 0.3
SEMA4D-222ENST00000540183 MCCP23508 829 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 CST5P28325 142 aaPredicted RBP16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 TOX2Q96NM4 488 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 NAPBQ9H115 298 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 ASTN1O14525 1302 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
SEMA4D-222ENST00000540183 SOWAHBA6NEL2 793 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 TIMP1P01033 207 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 FOSL2P15408 326 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 CDK7P50613 346 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 GJA9P57773 515 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 PDE4BQ07343 736 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 GNASQ5JWF2 1037 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 CCDC174Q6PII3 467 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 FAM133AQ8N9E0 248 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 VTI1AQ96AJ9 217 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 GLT1D1Q96MS3 346 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 FBXO40Q9UH90 709 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 MTMR7Q9Y216 660 aa16.93■□□□□ 0.3
SEMA4D-222ENST00000540183 GRXCR1A8MXD5 290 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 ACRP10323 421 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 OAZ1P54368 228 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 IKQ13123 557 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 GRIN2CQ14957 1233 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 TMEM63BQ5T3F8 832 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 PURBQ96QR8 312 aaKnown RBP16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 PPP1R12CQ9BZL4 782 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 ACAD9Q9H845 621 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 ELP1O95163 1332 aa16.92■□□□□ 0.3
SEMA4D-222ENST00000540183 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 ARVCFO00192 962 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 ALAS1P13196 640 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 DNAJB2P25686 324 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 SLC1A4P43007 532 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 STAT2P52630 851 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 FAM126BQ8IXS8 530 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 PCSK9Q8NBP7 692 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 TRERF1Q96PN7 1200 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 PDGFCQ9NRA1 345 aa16.91■□□□□ 0.3
SEMA4D-222ENST00000540183 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 ERC2O15083 957 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 CSF2RAP15509 400 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 MX1P20591 662 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 PBX2P40425 430 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
SEMA4D-222ENST00000540183 TMEM240Q5SV17 173 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms