RNA–Protein interactions for RNA: ENST00000540114.5

PPFIBP1-210, Transcript of PPFIA binding protein 1, humanhuman

TSL 2

Gene PPFIBP1, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-210ENST00000540114 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 PCDHA5Q9Y5H7 936 aa16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 MYO3BQ8WXR4 1341 aa16.84■□□□□ 0.29
PPFIBP1-210ENST00000540114 TMC6Q7Z403 805 aa16.83■□□□□ 0.29
PPFIBP1-210ENST00000540114 COA7Q96BR5 231 aa16.83■□□□□ 0.29
PPFIBP1-210ENST00000540114 PIM2Q9P1W9 311 aa16.83■□□□□ 0.29
PPFIBP1-210ENST00000540114 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.29
PPFIBP1-210ENST00000540114 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.29
PPFIBP1-210ENST00000540114 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 M0R2N6 131 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 EEF2P13639 858 aaKnown RBP16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 SEPT2Q15019 361 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 CSRNP1Q96S65 589 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZMYND12Q9H0C1 365 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 TUBE1Q9UJT0 475 aa16.83■□□□□ 0.28
PPFIBP1-210ENST00000540114 PRR29P0C7W0 189 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 SMARCA1P28370 1054 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 GNA11P29992 359 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNF543Q08ER8 600 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 POSTNQ15063 836 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 IMPACTQ9P2X3 320 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 HDAC9Q9UKV0 1011 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 A0A087X0B3 334 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 NIM1KQ8IY84 436 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 DAGLBQ8NCG7 672 aa16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
PPFIBP1-210ENST00000540114 AFMP43652 599 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ELF2Q15723 593 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 KMT5BQ4FZB7 885 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 JAKMIP3Q5VZ66 844 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 VEZTQ9HBM0 779 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 POLD1P28340 1107 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 CDC25AP30304 524 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 MDM2Q00987 491 aaPredicted RBP16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 IL17AQ16552 155 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 E4F1Q66K89 784 aaPredicted RBP16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNF397Q8NF99 534 aaPredicted RBP16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
PPFIBP1-210ENST00000540114 ENTPD3O75355 529 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 SLU7O95391 586 aaKnown RBP16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNRF3Q9ULT6 936 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 ACTN4O43707 911 aaKnown RBP16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 KIF20AO95235 890 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 SLC1A4P43007 532 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 ICA1Q05084 483 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 BPIFA3Q9BQP9 254 aa16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
PPFIBP1-210ENST00000540114 USP17L10C9JJH3 530 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 TPM4P67936 248 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 KCND1Q9NSA2 647 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 TMEM260Q9NX78 707 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 KIF2AO00139 706 aaPredicted RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 GH2P01242 217 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 CASP1P29466 404 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 LMOD1P29536 600 aaPredicted RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 TGFB2P61812 414 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 TMEM179Q6ZVK1 233 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 STAMQ92783 540 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNF70Q9UC06 446 aaPredicted RBP16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 COL4A5P29400 1685 aa16.79■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
PPFIBP1-210ENST00000540114 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
PPFIBP1-210ENST00000540114 DTHD1Q6ZMT9 781 aa16.78■□□□□ 0.28
PPFIBP1-210ENST00000540114 ZNF771Q7L3S4 317 aaPredicted RBP16.78■□□□□ 0.28
PPFIBP1-210ENST00000540114 KRT25Q7Z3Z0 450 aa16.78■□□□□ 0.28
PPFIBP1-210ENST00000540114 C4orf32Q8N8J7 132 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms