RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ALG1Q9BT22 464 aa21.88■■□□□ 1.09
TNFRSF1A-213ENST00000540022 RBM27Q9P2N5 1060 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PPP1R9AQ9ULJ8 1098 aa21.88■■□□□ 1.09
TNFRSF1A-213ENST00000540022 CAPN15O75808 1086 aa21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 TBC1D8O95759 1140 aa21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 INHBEP58166 350 aa21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 COG2Q14746 738 aa21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 CDC37Q16543 378 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PFKFB3Q16875 520 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 LOC285556D6RIA3 1793 aa21.87■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PNMA6FA0A0J9YX94 578 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ZBTB5O15062 677 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SCG2P13521 617 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 DSG3P32926 999 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 DDIT3P35638 169 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 QRICH1Q2TAL8 776 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 IFNL1Q8IU54 200 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ATG4CQ96DT6 458 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 CFHR5Q9BXR6 569 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 GJB4Q9NTQ9 266 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SEC63Q9UGP8 760 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PTPRFP10586 1907 aa21.86■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PPP1R11O60927 126 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 FOSBP53539 338 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 LARP1BQ659C4 914 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 WASF1Q92558 559 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 GPKOWQ92917 476 aaPredicted RBP eCLIP21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SHISA4Q96DD7 197 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ASCC2Q9H1I8 757 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 R3HDMLQ9H3Y0 253 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 KIF3AQ9Y496 699 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SPDYE16A6NNV3 312 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 WWC2Q6AWC2 1192 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 HOXC10Q9NYD6 342 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ADAMTS5Q9UNA0 930 aa21.85■■□□□ 1.09
TNFRSF1A-213ENST00000540022 MYPNQ86TC9 1320 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PDHXO00330 501 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 VWA5AO00534 786 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ALDH1A1P00352 501 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SYT1P21579 422 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 IRX3P78415 501 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 PABPC4Q13310 644 aaKnown RBP eCLIP21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 OTUD7BQ6GQQ9 843 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 HEATR3Q7Z4Q2 680 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ANKRD23Q86SG2 305 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 ABHD8Q96I13 439 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 P2RX7Q99572 595 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 SLC38A10Q9HBR0 1119 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 VPS54Q9P1Q0 977 aa21.84■■□□□ 1.09
TNFRSF1A-213ENST00000540022 TYW1BQ6NUM6 668 aa21.83■■□□□ 1.09
TNFRSF1A-213ENST00000540022 CCDC174Q6PII3 467 aa21.83■■□□□ 1.09
TNFRSF1A-213ENST00000540022 C8orf76Q96K31 380 aa21.83■■□□□ 1.09
TNFRSF1A-213ENST00000540022 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
TNFRSF1A-213ENST00000540022 CYP2C8P10632 490 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 PDCP20941 246 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 NOM1Q5C9Z4 860 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 POTEEQ6S8J3 1075 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 REPS2Q8NFH8 660 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ZNF296Q8WUU4 475 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 COA7Q96BR5 231 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 BARHL2Q9NY43 387 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 SLC45A1Q9Y2W3 748 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ZNF536O15090 1300 aa21.82■■□□□ 1.08
TNFRSF1A-213ENST00000540022 GPR25O00155 361 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 STXBP3O00186 592 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ZBED4O75132 1171 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 FDX1P10109 184 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 TAL1P17542 331 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 OSBPP22059 807 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 GUCY1B3Q02153 619 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 PKP1Q13835 747 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 FBXO11Q86XK2 927 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 FBXO18Q8NFZ0 1043 aa21.81■■□□□ 1.08
TNFRSF1A-213ENST00000540022 hCG_1984214I3L0E3 225 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 HERVK_113P62684 666 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 KRT40Q6A162 431 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ZNF713Q8N859 430 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 AMNQ9BXJ7 453 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 RAVER2Q9HCJ3 691 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 STX6O43752 255 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ICAM1P05362 532 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 USH1GQ495M9 461 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 LBX2Q6XYB7 198 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 CPXCR1Q8N123 301 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 AGBL1Q96MI9 1066 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 SH3GLB2Q9NR46 395 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 PNMA3Q9UL41 463 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 KCNJ14Q9UNX9 436 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 CTDP1Q9Y5B0 961 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 PCDHA1Q9Y5I3 950 aa21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 BAZ2BQ9UIF8 2168 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-213ENST00000540022 H3BQV1 296 aa21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 PEX10O60683 326 aa21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 XBP1P17861 261 aa21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 TMEM132BQ14DG7 1078 aa21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 ZNF214Q9UL59 606 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 MTMR6Q9Y217 621 aa21.79■■□□□ 1.08
TNFRSF1A-213ENST00000540022 RLFQ13129 1914 aa21.78■■□□□ 1.08
TNFRSF1A-213ENST00000540022 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms