RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 GRM4Q14833 912 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 TKFCQ3LXA3 575 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 IFFO2Q5TF58 517 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 NFXL1Q6ZNB6 911 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
PRPF19-204ENST00000539960 MMP19Q99542 508 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 MAP3K14Q99558 947 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 APBA2Q99767 749 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 FBXO40Q9UH90 709 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 A0A0G2JMZ2 1700 aa15.67■□□□□ 0.1
PRPF19-204ENST00000539960 PARP14Q460N5 1801 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 CCDC69A6NI79 296 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 CAPN15O75808 1086 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 PSMA5P28066 241 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 UBXN2AP68543 259 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRPF19-204ENST00000539960 SGMS1Q86VZ5 419 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 ZNF654Q8IZM8 581 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 NPLOC4Q8TAT6 608 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 TCEANC2Q96MN5 208 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 VAT1LQ9HCJ6 419 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 SLC5A4Q9NY91 659 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 HTTP42858 3142 aa15.66■□□□□ 0.1
PRPF19-204ENST00000539960 DDAH1O94760 285 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 MYCP01106 439 aaPredicted RBP15.65■□□□□ 0.1
PRPF19-204ENST00000539960 HMGCRP04035 888 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 INHAP05111 366 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 ALAS1P13196 640 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 CCL14Q16627 93 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 TRIB2Q92519 343 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 JMJD4Q9H9V9 463 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 SLC12A7Q9Y666 1083 aa15.65■□□□□ 0.1
PRPF19-204ENST00000539960 DHX16O60231 1041 aaKnown RBP15.64■□□□□ 0.09
PRPF19-204ENST00000539960 SEC24BO95487 1268 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 CALM1P0DP23 149 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 CALM2P0DP24 149 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 CALM3P0DP25 149 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 CPA1P15085 419 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 KIF5BP33176 963 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 MTFR1Q15390 333 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 MYL10Q9BUA6 226 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 RIOX1Q9H6W3 641 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 ZSWIM6Q9HCJ5 1215 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
PRPF19-204ENST00000539960 DIS3Q9Y2L1 958 aaKnown RBP15.64■□□□□ 0.09
PRPF19-204ENST00000539960 DNAJC25-GNG10A0A024R161 153 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 IGHA2P01877 340 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 PGK2P07205 417 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 CCL5P13501 91 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 CASTP20810 708 aaKnown RBP15.63■□□□□ 0.09
PRPF19-204ENST00000539960 RPS6KB1P23443 525 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 TRIM32Q13049 653 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 CDC37Q16543 378 aaPredicted RBP15.63■□□□□ 0.09
PRPF19-204ENST00000539960 SLC35G1Q2M3R5 365 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 ZNF792Q3KQV3 632 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 MFSD14CQ5VZR4 134 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 OLFML2BQ68BL8 750 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 SYNE3Q6ZMZ3 975 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 FANCBQ8NB91 859 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 CTCFLQ8NI51 663 aaPredicted RBP15.63■□□□□ 0.09
PRPF19-204ENST00000539960 MTMR8Q96EF0 704 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 TM6SF1Q9BZW5 370 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 FLRT1Q9NZU1 646 aa15.63■□□□□ 0.09
PRPF19-204ENST00000539960 PLXNB2O15031 1838 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 COL11A1P12107 1806 aaPredicted RBP15.62■□□□□ 0.09
PRPF19-204ENST00000539960 SMARCA1P28370 1054 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 GNAQP50148 359 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 FGD1P98174 961 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 CACNB2Q08289 660 aaPredicted RBP15.62■□□□□ 0.09
PRPF19-204ENST00000539960 QRICH1Q2TAL8 776 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 MAP3K21Q5TCX8 1036 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 Q6ZUG5 572 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 RUFY3Q7L099 469 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 LZTS2Q9BRK4 669 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 RNF208Q9H0X6 261 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 UNC93B1Q9H1C4 597 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 CYP46A1Q9Y6A2 500 aa15.62■□□□□ 0.09
PRPF19-204ENST00000539960 ZBTB5O15062 677 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 CYTH3O43739 400 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 TAL1P17542 331 aaPredicted RBP15.61■□□□□ 0.09
PRPF19-204ENST00000539960 RXRAP19793 462 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 SOX10P56693 466 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 ANAPC15P60006 121 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms