RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ABHD16BQ9H3Z7 469 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 VCPKMTQ9H867 229 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 IL23AQ9NPF7 189 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 PIH1D3Q9NQM4 214 aaKnown RBP7.17□□□□□ -1.26
CPSF7-219ENST00000539952 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 COG5Q9UP83 839 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 ATAD5Q96QE3 1844 aa7.17□□□□□ -1.26
CPSF7-219ENST00000539952 MAGEB6P1A0A0J9YX57 407 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 PNMA6EA0A0J9YXQ4 647 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 VWA5AO00534 786 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 ERC2O15083 957 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 SURF6O75683 361 aaKnown RBP7.16□□□□□ -1.26
CPSF7-219ENST00000539952 CABYRO75952 493 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 PGK2P07205 417 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 ASGR1P07306 291 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 ACRP10323 421 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 GJA9P57773 515 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 ACVR2BQ13705 512 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 TTF1Q15361 905 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-219ENST00000539952 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-219ENST00000539952 SIAH1Q8IUQ4 282 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 CDCA7LQ96GN5 454 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 KANSL2Q9H9L4 492 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 SLC4A7Q9Y6M7 1214 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 VCANP13611 3396 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 PRUNE2Q8WUY3 3088 aa7.16□□□□□ -1.26
CPSF7-219ENST00000539952 MAST2Q6P0Q8 1798 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 DNAH12Q6ZR08 3092 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 APBB1O00213 710 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 ZEB2O60315 1214 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 GPR37L1O60883 481 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 SNAI1O95863 264 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 CD4P01730 458 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 C6orf222P0C671 652 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 RARSP54136 660 aaKnown RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 NKX3-2P78367 333 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 SKIV2LQ15477 1246 aaKnown RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 KIAA1755Q5JYT7 1200 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 FAM126BQ8IXS8 530 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 AMOTL1Q8IY63 956 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 SPICE1Q8N0Z3 855 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 SSH3Q8TE77 659 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 RIOK1Q9BRS2 568 aaKnown RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 PPP1R12CQ9BZL4 782 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 CCDC8Q9H0W5 538 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-219ENST00000539952 EPHX3Q9H6B9 360 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 GOPCQ9HD26 462 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 PCDHA11Q9Y5I1 949 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 ROBO3Q96MS0 1386 aa7.15□□□□□ -1.26
CPSF7-219ENST00000539952 LTBP2Q14767 1821 aa7.15□□□□□ -1.27
CPSF7-219ENST00000539952 LAMA2P24043 3122 aaKnown RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 TULP1O00294 542 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ATP2A1O14983 1001 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 TLL1O43897 1013 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ZBED4O75132 1171 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 CYP2C18P33260 490 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ICA1Q05084 483 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 SLC9C2Q5TAH2 1124 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 PPP2R2DQ66LE6 453 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 OTOP2Q7RTS6 562 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 PRPF38AQ8NAV1 312 aaKnown RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 EAF2Q96CJ1 260 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 UPF3AQ9H1J1 476 aaKnown RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ANTXR1Q9H6X2 564 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 DCP1AQ9NPI6 582 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ATP8A2Q9NTI2 1148 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 DBNLQ9UJU6 430 aaKnown RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ZHX1Q9UKY1 873 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 ZNF214Q9UL59 606 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 PPP1R9AQ9ULJ8 1098 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 SYNRGQ9UMZ2 1314 aa7.14□□□□□ -1.27
CPSF7-219ENST00000539952 YBX2Q9Y2T7 364 aaKnown RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 CTDP1Q9Y5B0 961 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-219ENST00000539952 DNAJC25-GNG10A0A024R161 153 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 KIF28PB7ZC32 967 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 PI4K2BG5E9Z4 385 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 PFKMP08237 780 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 SUPT20HL2P0C7V6 817 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 EEF2P13639 858 aaKnown RBP7.13□□□□□ -1.27
CPSF7-219ENST00000539952 CDK8P49336 464 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 TFF2Q03403 129 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 ITGA7Q13683 1181 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 CCDC144BQ3MJ40 725 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 TMEM67Q5HYA8 995 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 ANKRD35Q8N283 1001 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 CHST13Q8NET6 341 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 REPS2Q8NFH8 660 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 PHOSPHO2Q8TCD6 241 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 HLA-CQ95604 372 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 TEX13BQ9BXU2 312 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 HIPK3Q9H422 1215 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-219ENST00000539952 FBXO40Q9UH90 709 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 Q9Y3F1 56 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 MTCH2Q9Y6C9 303 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 ZNFX1Q9P2E3 1918 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms