RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ARMC5Q96C12 935 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 SLC10A4Q96EP9 437 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 DDX11Q96FC9 970 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 PPP1R13BQ96KQ4 1090 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 GREM2Q9H772 168 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 MAP10Q9P2G4 905 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 ORC3Q9UBD5 711 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 HTTP42858 3142 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 ZNF804BA4D1E1 1349 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 A0A0U1RQG5 324 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 FAM237AA0A1B0GTK4 181 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 USP27XA6NNY8 438 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 H7C1W4 665 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 TADA3O75528 432 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 FMNL1O95466 1100 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 EXOSC10Q01780 885 aaKnown RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 AACSQ86V21 672 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 HNRNPLLQ8WVV9 542 aaKnown RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 MRPS27Q92552 414 aaKnown RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 EXOC4Q96A65 974 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 DEFB129Q9H1M3 183 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 C9orf78Q9NZ63 289 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 NOVA2Q9UNW9 492 aaKnown RBP8.74□□□□□ -1.01
CCDC60-204ENST00000539847 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 TCHHQ07283 1943 aa8.74□□□□□ -1.01
CCDC60-204ENST00000539847 NEURL1BA8MQ27 555 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 RPS6KA5O75582 802 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 SASH1O94885 1247 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 CSF1RP07333 972 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ERCC3P19447 782 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 CMA1P23946 247 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 IREB2P48200 963 aaKnown RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 HNRNPH2P55795 449 aaKnown RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ARHGEF6Q15052 776 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 BRD3Q15059 726 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 DLGAP5Q15398 846 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ZRSR1Q15695 479 aaKnown RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ERCC6LQ2NKX8 1250 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ARHGAP29Q52LW3 1261 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 CT47A1Q5JQC4 288 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 PRAMEF18Q5VWM3 479 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 PHLDB3Q6NSJ2 640 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 FAM173BQ6P4H8 233 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 TRIM65Q6PJ69 517 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 OTOP1Q7RTM1 612 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 BRAPQ7Z569 592 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 NSUN7Q8NE18 718 aaKnown RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 RABGGTAQ92696 567 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 WNT2BQ93097 391 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 EAF2Q96CJ1 260 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 FAM227BQ96M60 508 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 HELLSQ9NRZ9 838 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 ANGEL1Q9UNK9 670 aaKnown RBP8.73□□□□□ -1.01
CCDC60-204ENST00000539847 CHMP3Q9Y3E7 222 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 SALL1Q9NSC2 1324 aa8.73□□□□□ -1.01
CCDC60-204ENST00000539847 MKI67P46013 3256 aaKnown RBP8.72□□□□□ -1.01
CCDC60-204ENST00000539847 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 GRM8O00222 908 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 ARHGAP6O43182 974 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 DHX16O60231 1041 aaKnown RBP8.72□□□□□ -1.01
CCDC60-204ENST00000539847 IL1R1P14778 569 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 JUNDP17535 347 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 ITGA6P23229 1130 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 TNFAIP1Q13829 316 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 MCMDC2Q4G0Z9 681 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
CCDC60-204ENST00000539847 ARMCX5Q6P1M9 558 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 SYT10Q6XYQ8 523 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 Q6ZUG5 572 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 KIAA0825Q8IV33 1275 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 FSIP1Q8NA03 581 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 MNS1Q8NEH6 495 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 WNK4Q96J92 1243 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 CCDC85AQ96PX6 553 aaPredicted RBP8.72□□□□□ -1.01
CCDC60-204ENST00000539847 FSD1Q9BTV5 496 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 R3HDMLQ9H3Y0 253 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 CD209Q9NNX6 404 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
CCDC60-204ENST00000539847 TUBE1Q9UJT0 475 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 TRIM17Q9Y577 477 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 CEP290O15078 2479 aa8.72□□□□□ -1.01
CCDC60-204ENST00000539847 LAMB1P07942 1786 aa8.71□□□□□ -1.01
CCDC60-204ENST00000539847 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 IVLP07476 585 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.02
CCDC60-204ENST00000539847 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-204ENST00000539847 CASP7P55210 303 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 GTF2IP78347 998 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms