RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ZMYND8Q9ULU4 1186 aaPredicted RBP19.8■□□□□ 0.76
DDB1-215ENST00000539712 BTNL9Q6UXG8 535 aa19.79■□□□□ 0.76
DDB1-215ENST00000539712 ZNF467Q7Z7K2 595 aaPredicted RBP19.79■□□□□ 0.76
DDB1-215ENST00000539712 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
DDB1-215ENST00000539712 ARRDC4Q8NCT1 418 aa19.79■□□□□ 0.76
DDB1-215ENST00000539712 DSCC1Q9BVC3 393 aa19.79■□□□□ 0.76
DDB1-215ENST00000539712 FBXO40Q9UH90 709 aa19.79■□□□□ 0.76
DDB1-215ENST00000539712 MTMR7Q9Y216 660 aa19.79■□□□□ 0.76
DDB1-215ENST00000539712 CTDP1Q9Y5B0 961 aaPredicted RBP19.79■□□□□ 0.76
DDB1-215ENST00000539712 ZNF213O14771 459 aa19.78■□□□□ 0.76
DDB1-215ENST00000539712 SYN1P17600 705 aa19.78■□□□□ 0.76
DDB1-215ENST00000539712 LRRC41Q15345 812 aa19.78■□□□□ 0.76
DDB1-215ENST00000539712 TTC14Q96N46 770 aa19.78■□□□□ 0.76
DDB1-215ENST00000539712 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
DDB1-215ENST00000539712 ISY1Q9ULR0 285 aaKnown RBP19.78■□□□□ 0.76
DDB1-215ENST00000539712 SYNGAP1Q96PV0 1343 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 SNHG28P0DPA3 235 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 PDHBP11177 359 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 SLC16A2P36021 539 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 CNTN2Q02246 1040 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 IKQ13123 557 aaPredicted RBP19.77■□□□□ 0.76
DDB1-215ENST00000539712 ANKRD35Q8N283 1001 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 FAM133AQ8N9E0 248 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 RNF41Q9H4P4 317 aaPredicted RBP19.77■□□□□ 0.76
DDB1-215ENST00000539712 A1CFQ9NQ94 594 aaKnown RBP19.77■□□□□ 0.76
DDB1-215ENST00000539712 RNF146Q9NTX7 359 aa19.77■□□□□ 0.76
DDB1-215ENST00000539712 LAMA4Q16363 1823 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 MUM1L1Q5H9M0 696 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 CCDC174Q6PII3 467 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 ESR2Q92731 530 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 LENG1Q96BZ8 264 aaPredicted RBP19.76■□□□□ 0.75
DDB1-215ENST00000539712 ZKSCAN3Q9BRR0 538 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 KATNBL1Q9H079 304 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 RANBP17Q9H2T7 1088 aaKnown RBP19.76■□□□□ 0.75
DDB1-215ENST00000539712 ACAD9Q9H845 621 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 ASTN1O14525 1302 aa19.76■□□□□ 0.75
DDB1-215ENST00000539712 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
DDB1-215ENST00000539712 SOWAHBA6NEL2 793 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 BMP8BP34820 402 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
DDB1-215ENST00000539712 CCDC96Q2M329 555 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 TKFCQ3LXA3 575 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 ANKS1AQ92625 1134 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 TRERF1Q96PN7 1200 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 GPCPD1Q9NPB8 672 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 XPNPEP3Q9NQH7 507 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
DDB1-215ENST00000539712 MCM3APO60318 1980 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 ADCY6O43306 1168 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 KDM4AO75164 1064 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 ADAMTS4O75173 837 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 PGK1P00558 417 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 ICAM1P05362 532 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 RARBP10826 455 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 ALAS1P13196 640 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 AKR1A1P14550 325 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 CHMLP26374 656 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 ADCYAP1R1P41586 468 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 MAGEA10P43363 369 aaPredicted RBP19.74■□□□□ 0.75
DDB1-215ENST00000539712 ZNF543Q08ER8 600 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 SNX17Q15036 470 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 SYDE2Q5VT97 1194 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 SLC39A5Q6ZMH5 540 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 DGKHQ86XP1 1220 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.74■□□□□ 0.75
DDB1-215ENST00000539712 ZSWIM5Q9P217 1185 aa19.74■□□□□ 0.75
DDB1-215ENST00000539712 B4E1Z4 1266 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 KBTBD13C9JR72 458 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 ACVR2BQ13705 512 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 ARMCX2Q7L311 632 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 CCDC144CPQ8IYA2 1237 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 PHF24Q9UPV7 400 aa19.73■□□□□ 0.75
DDB1-215ENST00000539712 DDX49Q9Y6V7 483 aaKnown RBP19.73■□□□□ 0.75
DDB1-215ENST00000539712 A0A1W2PPC1 479 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 POTEB2H3BUK9 544 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
DDB1-215ENST00000539712 NT5C2P49902 561 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 RTP1P59025 263 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 PTH1RQ03431 593 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 IMMTQ16891 758 aaKnown RBP19.72■□□□□ 0.75
DDB1-215ENST00000539712 CCSAPQ6IQ19 270 aaPredicted RBP19.72■□□□□ 0.75
DDB1-215ENST00000539712 ENAHQ8N8S7 591 aaPredicted RBP19.72■□□□□ 0.75
DDB1-215ENST00000539712 FERMT2Q96AC1 680 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 PURBQ96QR8 312 aaKnown RBP19.72■□□□□ 0.75
DDB1-215ENST00000539712 CYP39A1Q9NYL5 469 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 CTNNA3Q9UI47 895 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 FAM184BQ9ULE4 1060 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 CCPG1Q9ULG6 757 aa19.72■□□□□ 0.75
DDB1-215ENST00000539712 IRX5P78411 483 aaPredicted RBP19.71■□□□□ 0.75
DDB1-215ENST00000539712 KLHDC9Q8NEP7 349 aa19.71■□□□□ 0.75
DDB1-215ENST00000539712 CLEC4DQ8WXI8 215 aa19.71■□□□□ 0.75
DDB1-215ENST00000539712 ZSCAN10Q96SZ4 725 aaPredicted RBP19.71■□□□□ 0.75
DDB1-215ENST00000539712 ABHD16BQ9H3Z7 469 aa19.71■□□□□ 0.75
DDB1-215ENST00000539712 ZHX1Q9UKY1 873 aaPredicted RBP19.71■□□□□ 0.75
DDB1-215ENST00000539712 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
DDB1-215ENST00000539712 SOX1O00570 391 aaPredicted RBP19.7■□□□□ 0.74
DDB1-215ENST00000539712 DUSP11O75319 330 aaKnown RBP19.7■□□□□ 0.74
DDB1-215ENST00000539712 GOLGA8HP0CJ92 632 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 CCDC144BQ3MJ40 725 aa19.7■□□□□ 0.74
DDB1-215ENST00000539712 C1orf53Q5VUE5 145 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms