RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SPON2Q9BUD6 331 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 EHD4Q9H223 541 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 ZFYVE28Q9HCC9 887 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 PICK1Q9NRD5 415 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 SWAP70Q9UH65 585 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 STRIP2Q9ULQ0 834 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 TRAK1Q9UPV9 953 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 THRAP3Q9Y2W1 955 aaKnown RBP4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 USP31Q70CQ4 1352 aa4.88□□□□□ -1.63
AC055720.1-201ENST00000539552 CDK13Q14004 1512 aaKnown RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 FAM155AB1AL88 458 aaPredicted RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 IGF2BP3O00425 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 RAPGEF3O95398 923 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 MCCP23508 829 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 BDNFP23560 247 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 ZEB1P37275 1124 aaPredicted RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 GNALP38405 381 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 GYS2P54840 703 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 CHMP4BP1P59074 171 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 HDAC1Q13547 482 aaPredicted RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 DHX8Q14562 1220 aaKnown RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 WDR78Q5VTH9 848 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 KIAA0907Q7Z7F0 614 aaPredicted RBP4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 SPACA3Q8IXA5 215 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 APPBP2Q92624 585 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 PKNOX2Q96KN3 472 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 C20orf173Q96LM9 149 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 FOXQ1Q9C009 403 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 ZNF576Q9H609 170 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 DISC1Q9NRI5 854 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 HOMER2Q9NSB8 354 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 FANCLQ9NW38 375 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 SNTG2Q9NY99 539 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 RAPGEF2Q9Y4G8 1499 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 ZMYM4Q5VZL5 1548 aa4.87□□□□□ -1.63
AC055720.1-201ENST00000539552 MYO3AQ8NEV4 1616 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 A0A1W2PP55 124 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 CAND2O75155 1236 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 LMNB1P20700 586 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 EXOSC10Q01780 885 aaKnown RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 RASA3Q14644 834 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 VPS72Q15906 364 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 PRRT2Q7Z6L0 340 aaPredicted RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 PCGF5Q86SE9 256 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 SAMD3Q8N6K7 520 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 RASGRP4Q8TDF6 673 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 DEPDC7Q96QD5 511 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 APBA2Q99767 749 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 NOC4LQ9BVI4 516 aaKnown RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 CCDC86Q9H6F5 360 aaKnown RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 KRT82Q9NSB4 513 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 FBXO9Q9UK97 447 aaPredicted RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 PITPNM2Q9BZ72 1349 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 CNTNAP4Q9C0A0 1308 aa4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 COL16A1Q07092 1604 aaPredicted RBP4.86□□□□□ -1.63
AC055720.1-201ENST00000539552 IFRD1O00458 451 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 PSPNO60542 156 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 LDHAP00338 332 aaKnown RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 HSP90AA1P07900 732 aaKnown RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 GBP2P32456 591 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 PPP2R3AQ06190 1150 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 POU5F1BQ06416 359 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 COL9A2Q14055 689 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 CCDC85BQ15834 202 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 KIF4BQ2VIQ3 1234 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 MEI1Q5TIA1 1274 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 TCERG1LQ5VWI1 586 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 ZNF772Q68DY9 489 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 HOMER1Q86YM7 354 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 EPS8L3Q8TE67 593 aaKnown RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 SH3TC2Q8TF17 1288 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 WDR89Q96FK6 387 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 SLC39A13Q96H72 371 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 HEXIM2Q96MH2 286 aaKnown RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 TCF12Q99081 682 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 NAP1L4Q99733 375 aaKnown RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 BCO2Q9BYV7 579 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 ZNF408Q9H9D4 720 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 PRDM5Q9NQX1 630 aaPredicted RBP4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 SFMBT1Q9UHJ3 866 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 RTEL1-TNFRSF6BF6WH68 1400 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 PHLPP1O60346 1717 aa4.85□□□□□ -1.63
AC055720.1-201ENST00000539552 SCAF11Q99590 1463 aaKnown RBP4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 CCER2I3L3R5 266 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 RFXAPO00287 272 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 GSTP1P09211 210 aaKnown RBP4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 MASP1P48740 699 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 RAB33AQ14088 237 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 ZRSR2Q15696 482 aaKnown RBP4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 TMEM132EQ6IEE7 984 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 NXPE4Q6UWF7 544 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 CDC37L1Q7L3B6 337 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 GALNT12Q8IXK2 581 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 CNPY4Q8N129 248 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 ISL2Q96A47 359 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 ZNF512BQ96KM6 892 aaPredicted RBP4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 FEZ1Q99689 392 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 RSRP1Q9BUV0 290 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 OSBPL7Q9BZF2 842 aa4.84□□□□□ -1.63
AC055720.1-201ENST00000539552 NPHS2Q9NP85 383 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms