RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 RBM8AQ9Y5S9 174 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RFX7Q2KHR2 1363 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 UBN2Q6ZU65 1347 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZNF609O15014 1411 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GOLGA8AA7E2F4 631 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 STX6O43752 255 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATP6V1G2O95670 118 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CPA1P15085 419 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 WHAMMP3Q1A5X7 153 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ACCSLQ4AC99 568 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DHX40Q8IX18 779 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KIRREL3Q8IZU9 778 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NCSTNQ92542 709 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NACC2Q96BF6 587 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 MAML3Q96JK9 1138 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PLA2G12BQ9BX93 195 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 OXCT2Q9BYC2 517 aaPredicted RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PUS3Q9BZE2 481 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TNMDQ9H2S6 317 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 HOXC10Q9NYD6 342 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 AGPSO00116 658 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 STXBP3O00186 592 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATP9BO43861 1147 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PPP1R12BO60237 982 aaPredicted RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ABL1P00519 1130 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CHGBP05060 677 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC175P0C221 793 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TIMM10P62072 90 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SULT2A1Q06520 285 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DDB1Q16531 1140 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PACS1Q6VY07 963 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RUFY3Q7L099 469 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 C1orf131Q8NDD1 294 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NEUROD6Q96NK8 337 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TM6SF1Q9BZW5 370 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ARHGEF10LQ9HCE6 1279 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZSWIM6Q9HCJ5 1215 aa6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 BZW2Q9Y6E2 419 aaKnown RBP6.41□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GOLGA8KD6RF30 607 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 EVI5O60447 810 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CSF1RP07333 972 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZKSCAN1P17029 563 aaPredicted RBP6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 XBP1P17861 261 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KIF5AQ12840 1032 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TMC6Q7Z403 805 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RSPH3Q86UC2 560 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NLRP10Q86W26 655 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LRRC49Q8IUZ0 686 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SLC15A3Q8IY34 581 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NSUN7Q8NE18 718 aaKnown RBP6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SMARCC2Q8TAQ2 1214 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NRDE2Q9H7Z3 1164 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CROTQ9UKG9 612 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TTLL3Q9Y4R7 772 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 STK24Q9Y6E0 443 aa6.4□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TAF5LO75529 589 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SFPQP23246 707 aaKnown RBP eCLIP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 IL6STP40189 918 aaPredicted RBP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 FOXD4L5Q5VV16 416 aaPredicted RBP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BICDL1Q6ZP65 573 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TMEM110Q86TL2 294 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 HOMER1Q86YM7 354 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SYNE4Q8N205 404 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 COG1Q8WTW3 980 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 FOXD4L4Q8WXT5 416 aaPredicted RBP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MTRQ99707 1265 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NOD2Q9HC29 1040 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DMAP1Q9NPF5 467 aaPredicted RBP6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CTNNAL1Q9UBT7 734 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 LIMCH1Q9UPQ0 1083 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SLC4A7Q9Y6M7 1214 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SPATA31A5Q5VU36 1347 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SPATA31A7Q8IWB4 1347 aa6.4□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MYH15Q9Y2K3 1946 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TARSL2A2RTX5 802 aaKnown RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NUTM2BA6NNL0 878 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NUTM2EB1AL46 878 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MYO1BO43795 1136 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CAPN15O75808 1086 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MMEP08473 750 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PARP1P09874 1014 aaKnown RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ABL2P42684 1182 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CTCFP49711 727 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CCT8P50990 548 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 OXCT1P55809 520 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 VSNL1P62760 191 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 STX1AQ16623 288 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 INF2Q27J81 1249 aa6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TBC1D10BQ4KMP7 808 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NUTM2AQ8IVF1 878 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MARCH10Q8NA82 808 aaPredicted RBP6.39□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KBTBD3Q8NAB2 608 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms