RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 RPUSD2Q8IZ73 545 aaKnown RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 PLD6Q8N2A8 252 aaKnown RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 KREMEN2Q8NCW0 462 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 GIMAP7Q8NHV1 300 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 MFSD3Q96ES6 412 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 TCTN2Q96GX1 697 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 FCRL3Q96P31 734 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 PCDH12Q9NPG4 1184 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 SFMBT1Q9UHJ3 866 aa4.49□□□□□ -1.69
SNHG1-210ENST00000539303 TMEFF2Q9UIK5 374 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-210ENST00000539303 hCG_2014768A0A024R1R8 64 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 GNAT3A8MTJ3 354 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 FAM155AB1AL88 458 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 FKTNO75072 461 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 POU3F3P20264 500 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 GRB10Q13322 594 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 ZNF460Q14592 562 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 CLEC16AQ2KHT3 1053 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 CYP27C1Q4G0S4 372 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 ZC3H12BQ5HYM0 836 aaKnown RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 SLC35F1Q5T1Q4 408 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 POMZP3Q6PJE2 187 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 ZPBP2Q6X784 338 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 BRAPQ7Z569 592 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 CCDC103Q8IW40 242 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 SYNPOQ8N3V7 929 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 CRACR2BQ8N4Y2 399 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 FRS2Q8WU20 508 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 KCTD13Q8WZ19 329 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 SCLYQ96I15 445 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 HSPA12BQ96MM6 686 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 IPO9Q96P70 1041 aaKnown RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 DBNDD2Q9BQY9 259 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 TARS2Q9BW92 718 aaKnown RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 SLC12A9Q9BXP2 914 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 GPR62Q9BZJ7 368 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 PRR13Q9NZ81 148 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 ZSWIM5Q9P217 1185 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 PLAAQ9Y263 795 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 SF3B6Q9Y3B4 125 aaKnown RBP4.48□□□□□ -1.69
SNHG1-210ENST00000539303 PRKAB1Q9Y478 270 aa4.48□□□□□ -1.69
SNHG1-210ENST00000539303 CCDC163A0A0D9SF12 145 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 AURKAO14965 403 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 PDE8AO60658 829 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 RASGRP1O95267 797 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 SCG5P05408 212 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 GSNP06396 782 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 CEACAM5P06731 702 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 SYPP08247 313 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 LCP1P13796 627 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 FSTP19883 344 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 TPP2P29144 1249 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 HOXA10P31260 410 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 HOXC12P31275 282 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 EVA1CP58658 441 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 MAP4K2Q12851 820 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 FNDC3BQ53EP0 1204 aaKnown RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 RTP2Q5QGT7 225 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 CNNM4Q6P4Q7 775 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 ARHGAP27Q6ZUM4 889 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 TSPYL5Q86VY4 417 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 JAMLQ86YT9 394 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 USHBP1Q8N6Y0 703 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 DAGLBQ8NCG7 672 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 PIWIL2Q8TC59 973 aaKnown RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 COPS5Q92905 334 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 UBE2FQ969M7 185 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 COX4I2Q96KJ9 171 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 OSBPL1AQ9BXW6 950 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 MRPL4Q9BYD3 311 aaKnown RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 FOXP3Q9BZS1 431 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 ASCC2Q9H1I8 757 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 CYP26B1Q9NR63 512 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 CLEC1BQ9P126 229 aa4.47□□□□□ -1.69
SNHG1-210ENST00000539303 TNPO3Q9Y5L0 923 aaKnown RBP4.47□□□□□ -1.69
SNHG1-210ENST00000539303 C2orf71A6NGG8 1288 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 GSG1L2A8MUP6 293 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 MSCO60682 206 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 RFPL3O75679 317 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 GDF11O95390 407 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 PROCP04070 461 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 VIL1P09327 827 aaKnown RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 GSTM1P09488 218 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 PLS3P13797 630 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 VAV1P15498 845 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 CD96P40200 585 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 STAT3P40763 770 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 CDKN1CP49918 316 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 IGBP1P78318 339 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 RSPO4Q2I0M5 234 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 TRIM61Q5EBN2 209 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 DUSP27Q5VZP5 1158 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 MBLAC2Q68D91 279 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.7
SNHG1-210ENST00000539303 RNF180Q86T96 592 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 LRRTM3Q86VH5 581 aa4.46□□□□□ -1.7
SNHG1-210ENST00000539303 ZDHHC13Q8IUH4 622 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms