RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 VPS36Q86VN1 386 aa17.51■□□□□ 0.39
ATP2A2-204ENST00000539276 MYO1AQ9UBC5 1043 aa17.51■□□□□ 0.39
ATP2A2-204ENST00000539276 ERVV-1B6SEH8 477 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 UBE4AQ14139 1066 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 ANKRD2Q9GZV1 360 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 TFR2Q9UP52 801 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 RRP15Q9Y3B9 282 aaKnown RBP17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 GYPCP04921 128 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 OR52Z1P0C646 297 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 FBXL16Q8N461 479 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 CCDC113Q9H0I3 377 aa17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
ATP2A2-204ENST00000539276 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 PRDX5P30044 214 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 ERFEQ4G0M1 354 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 KRT25Q7Z3Z0 450 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 MED4Q9NPJ6 270 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 NDUFAB1O14561 156 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 EEF1GP26641 437 aaKnown RBP17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
ATP2A2-204ENST00000539276 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 RFC4P35249 363 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 MECOMQ03112 1051 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 CALCRLQ16602 461 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 ZFYVE27Q5T4F4 411 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 SRBD1Q8N5C6 995 aaKnown RBP17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 TRIM58Q8NG06 486 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 LRRC27Q9C0I9 530 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 INTS13Q9NVM9 706 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 XRN1Q8IZH2 1706 aaKnown RBP17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 USP8P40818 1118 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 NOX5Q96PH1 765 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 JCADQ9P266 1359 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 SEMA3EO15041 775 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 GNPATO15228 680 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 PLCG1P19174 1290 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 GTF2A1P52655 376 aaPredicted RBP17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 P2RX5Q93086 422 aa17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 NHEJ1Q9H9Q4 299 aaPredicted RBP17.48■□□□□ 0.39
ATP2A2-204ENST00000539276 DPYDQ12882 1025 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 NOA1Q8NC60 698 aaKnown RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 RPGRIP1Q96KN7 1286 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 RGPD8O14715 1765 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 ATP1A2P50993 1020 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 GUCY2FP51841 1108 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 SLC7A5Q01650 507 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 LRRC41Q15345 812 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 DCAF17Q5H9S7 520 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 ATP8A2Q9NTI2 1148 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 MYO1CO00159 1063 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 ATP2C1P98194 919 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 SLC9C1Q4G0N8 1177 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 HERC4Q5GLZ8 1057 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 KCTD16Q68DU8 428 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 EYA3Q99504 573 aa17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
ATP2A2-204ENST00000539276 FRMPD2Q68DX3 1309 aaPredicted RBP17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 SASH3O75995 380 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 NYXQ9GZU5 481 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 PPP1R12BO60237 982 aaPredicted RBP17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 ZNF18P17022 549 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 BCAS4Q8TDM0 211 aa17.46■□□□□ 0.39
ATP2A2-204ENST00000539276 LGALS16A8MUM7 142 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 FOXP2O15409 715 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 ATP1A1P05023 1023 aaKnown RBP17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 PPP1R2P41236 205 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 RASSF7Q02833 373 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 OTUD6BQ8N6M0 293 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 PNKPQ96T60 521 aa17.46■□□□□ 0.38
ATP2A2-204ENST00000539276 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 MOCS3O95396 460 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 GNGT1P63211 74 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 SLC44A5Q8NCS7 719 aa17.45■□□□□ 0.38
ATP2A2-204ENST00000539276 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms