RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TTC38Q5R3I4 469 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 NUP58Q9BVL2 599 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 MAPK8IP1Q9UQF2 711 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 CSF1RP07333 972 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 PTGDRQ13258 359 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 ADSSL1Q8N142 457 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 JPH2Q9BR39 696 aaPredicted RBP20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 PLA2G12BQ9BX93 195 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 THAP9Q9H5L6 903 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 A1BGP04217 495 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 NNTQ13423 1086 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 AGPAT5Q9NUQ2 364 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 MBD4O95243 580 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 SRGNP10124 158 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 TRIM21P19474 475 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 ZBED6P86452 979 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 PKN1Q16512 942 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 KDM7AQ6ZMT4 941 aa20.74■□□□□ 0.91
SFSWAP-207ENST00000538548 TRIM49BA6NDI0 452 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 TACC1O75410 805 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 CDK17Q00537 523 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 TCIRG1Q13488 830 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 EPN3Q9H201 632 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 NAP1L1P55209 391 aaKnown RBP20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 PPARAQ07869 468 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 EMC10Q5UCC4 262 aa20.73■□□□□ 0.91
SFSWAP-207ENST00000538548 SOS2Q07890 1332 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 GSG1L2A8MUP6 293 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 CHUKO15111 745 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 ARID4AP29374 1257 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 LSP1P33241 339 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 CYP27A1Q02318 531 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 APBA1Q02410 837 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 NAA35Q5VZE5 725 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 TNFRSF25Q93038 417 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 ZIM3Q96PE6 472 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 MAGEC2Q9UBF1 373 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 TCP1P17987 556 aaKnown RBP20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 SLC7A5Q01650 507 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 SPA17Q15506 151 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 HAUS3Q68CZ6 603 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 EXOC1Q9NV70 894 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 SUFUQ9UMX1 484 aa20.72■□□□□ 0.91
SFSWAP-207ENST00000538548 C21orf2O43822 256 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 USO1O60763 962 aaKnown RBP20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 UBAC1Q9BSL1 405 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 RTL9Q8NET4 1388 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 MYH2Q9UKX2 1941 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 CLSTN1O94985 981 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 PCCAP05165 728 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 UQCRFS1P1P0C7P4 283 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 ATP1A2P50993 1020 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 PLCB4Q15147 1175 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 SH2D3CQ8N5H7 860 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 OSBPL9Q96SU4 736 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 ARMT1Q9H993 441 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 LRWD1Q9UFC0 647 aa20.71■□□□□ 0.91
SFSWAP-207ENST00000538548 B4DLN1 442 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 TDO2P48775 406 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 PMS1P54277 932 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC96Q2M329 555 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 RNF41Q9H4P4 317 aaPredicted RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 GGA2Q9UJY4 613 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 HYOU1Q9Y4L1 999 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 CAPN6Q9Y6Q1 641 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 CLGNO14967 610 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 PRDM1O75626 825 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 RDXP35241 583 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 MATR3P43243 847 aaKnown RBP eCLIP20.7■□□□□ 0.93e-6■■■■□ 20.4
SFSWAP-207ENST00000538548 PHKA1P46020 1223 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 SMTNP53814 917 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC181Q5TID7 509 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 VGLL2Q8N8G2 317 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 NOC3LQ8WTT2 800 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 TRIM47Q96LD4 638 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 RNPC3Q96LT9 517 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 CCDC42Q96M95 316 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 SH2D4AQ9H788 454 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 VCPKMTQ9H867 229 aa20.7■□□□□ 0.9
SFSWAP-207ENST00000538548 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 KRT14P02533 472 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 FUT2Q10981 343 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 NEDD9Q14511 834 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 GLE1Q53GS7 698 aaKnown RBP20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 KCTD16Q68DU8 428 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 IQCKQ8N0W5 287 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 MAGEB6Q8N7X4 407 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 ZKSCAN4Q969J2 545 aaPredicted RBP20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 ZNF263O14978 683 aa20.69■□□□□ 0.9
SFSWAP-207ENST00000538548 PPP1R37O75864 691 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms