RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OPA1O60313 960 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 WDHD1O75717 1129 aaPredicted RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 ZNF202O95125 648 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 EPB41P11171 864 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 BMP4P12644 408 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 FGFR3P22607 806 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 INPP5BP32019 993 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 APBA1Q02410 837 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 LMNB2Q03252 620 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 ITIH3Q06033 890 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 CKAP4Q07065 602 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 DPYDQ12882 1025 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 UBAP2LQ14157 1087 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 DCTN1Q14203 1278 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 EIF4A2Q14240 407 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 SLMAPQ14BN4 828 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 STK38Q15208 465 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 SF3A1Q15459 793 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 DPCR1Q3MIW9 517 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 CFAP100Q494V2 611 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 SULT6B1Q6IMI4 303 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 CCDC70Q6NSX1 233 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 DHX32Q7L7V1 743 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 RASGRP2Q7LDG7 609 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 MLKLQ8NB16 471 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 NSUN7Q8NE18 718 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 FAM76AQ8TAV0 307 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 ENOX1Q8TC92 643 aaKnown RBP7.57□□□□□ -1.2
USP28-207ENST00000538475 P3H4Q92791 437 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 DHX58Q96C10 678 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 CTAGE1Q96RT6 745 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 USP28Q96RU2 1077 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 WDR24Q96S15 920 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 ZIC5Q96T25 663 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 ABCB6Q9NP58 842 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 FAM169AQ9Y6X4 670 aa7.57□□□□□ -1.2
USP28-207ENST00000538475 NEDD4P46934 1319 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 WDR19Q8NEZ3 1342 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 CDHR2Q9BYE9 1310 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 MYO5AQ9Y4I1 1855 aaKnown RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 C4AP0C0L4 1744 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 C4BP0C0L5 1744 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 PTPRUQ92729 1446 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 EXOC5O00471 708 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 SPTLC2O15270 562 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 TAF5LO75529 589 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 CPA1P15085 419 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 GPTP24298 496 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 ERCC5P28715 1186 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 IFFO1Q0D2I5 559 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 NMIQ13287 307 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 PTK7Q13308 1070 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 TRIM14Q14142 442 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 ZKSCAN8Q15776 578 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 PREPLQ4J6C6 727 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 WLSQ5T9L3 541 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 TMTC1Q8IUR5 882 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 CNGA4Q8IV77 575 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 TC2NQ8N9U0 490 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 HSD3B7Q9H2F3 369 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 ACTR5Q9H9F9 607 aaPredicted RBP7.56□□□□□ -1.2
USP28-207ENST00000538475 VEZTQ9HBM0 779 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 BATF3Q9NR55 127 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 TOMM22Q9NS69 142 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 MYH10P35580 1976 aa7.56□□□□□ -1.2
USP28-207ENST00000538475 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 ECM29Q5VYK3 1845 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 LMO7Q8WWI1 1683 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 CHD4Q14839 1912 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 A0A1B0GUA9 196 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 CCDC189A1A4V9 331 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 ANKRD18BA2A2Z9 1011 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 AKR1B15C9JRZ8 316 aaPredicted RBP7.55□□□□□ -1.2
USP28-207ENST00000538475 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
USP28-207ENST00000538475 FANCGO15287 622 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 DKK1O94907 266 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 BCRP11274 1271 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 HSP90B1P14625 803 aaKnown RBP7.55□□□□□ -1.2
USP28-207ENST00000538475 GCFC2P16383 781 aaKnown RBP7.55□□□□□ -1.2
USP28-207ENST00000538475 ZNF18P17022 549 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 ELF1P32519 619 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 IRAK1P51617 712 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 USP14P54578 494 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 SLC8A3P57103 927 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 OS9Q13438 667 aaPredicted RBP7.55□□□□□ -1.2
USP28-207ENST00000538475 STIM1Q13586 685 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
USP28-207ENST00000538475 ALS2CLQ60I27 953 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms