RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.45
TNFRSF1A-211ENST00000538363 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 IRF6O14896 467 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 F13A1P00488 732 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CETPP11597 493 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 VCAM1P19320 739 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GNA11P29992 359 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 KRT2P35908 639 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GTF2A2P52657 109 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 NUBP1P53384 320 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SNAP25P60880 206 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GRM1Q13255 1194 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 COG2Q14746 738 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 USH1GQ495M9 461 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 LDLRAD1Q5T700 205 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FBXO18Q8NFZ0 1043 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CUL5Q93034 780 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 JMJD4Q9H9V9 463 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SH3GLB2Q9NR46 395 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 HOXC10Q9NYD6 342 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 KCNJ14Q9UNX9 436 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PCDHA1Q9Y5I3 950 aa12.26□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SMCO2A6NFE2 343 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FDX1P10109 184 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ADCY7P51828 1080 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MRPL12P52815 198 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PLS1Q14651 629 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 QRICH1Q2TAL8 776 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CPXCR1Q8N123 301 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 COA7Q96BR5 231 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZNF396Q96N95 335 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MTMR6Q9Y217 621 aa12.25□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCDC194A0A1B0GVG4 234 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CYTH3O43739 400 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PLA2G6O60733 806 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BRD1O95696 1058 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FUT2Q10981 343 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 DGKZQ13574 1117 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PKP1Q13835 747 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PKN1Q16512 942 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SH3D19Q5HYK7 790 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 KIAA1755Q5JYT7 1200 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 WWC2Q6AWC2 1192 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 RGMBQ6NW40 437 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BTNL9Q6UXG8 535 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BAZ2BQ9UIF8 2168 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCPG1Q9ULG6 757 aa12.24□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PHIPQ8WWQ0 1821 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCL15-CCL14A0A0B4J2E2 113 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MMP1P03956 469 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCL15Q16663 113 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CST9Q5W186 159 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FAM177A1Q8N128 213 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GJB4Q9NTQ9 266 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CFAP45Q9UL16 551 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MRPL11Q9Y3B7 192 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ABCB11O95342 1321 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PTPRFP10586 1907 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 STXBP3O00186 592 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ALAS1P13196 640 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 DDIT3P35638 169 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 KRT85P78386 507 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SPRYD7Q5W111 196 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BRAPQ7Z569 592 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PHF20Q9BVI0 1012 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms