RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 STIM1Q13586 685 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
CPSF7-218ENST00000537641 LRRC31Q6UY01 552 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 ZNF507Q8TCN5 953 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 MTRQ99707 1265 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 MAST2Q6P0Q8 1798 aa13.63□□□□□ -0.23
CPSF7-218ENST00000537641 MYH1P12882 1939 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
CPSF7-218ENST00000537641 TRIM66O15016 1216 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 SYF2O95926 243 aaKnown RBP13.62□□□□□ -0.23
CPSF7-218ENST00000537641 DNM2P50570 870 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 CCDC122Q5T0U0 273 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 CCDC170Q8IYT3 715 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 RETREG2Q8NC44 543 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 COG1Q8WTW3 980 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 STAMQ92783 540 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 JAKMIP2Q96AA8 810 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
CPSF7-218ENST00000537641 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-218ENST00000537641 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
CPSF7-218ENST00000537641 COL1A1P02452 1464 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-218ENST00000537641 EIF3CLB5ME19 914 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 SCG2P13521 617 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 CALML3P27482 149 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 STAT6P42226 847 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 PRCPP42785 496 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 TNNT3P45378 269 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 IRF2BP1Q8IU81 584 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 IQCDQ96DY2 449 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 EIF3CQ99613 913 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 NARFQ9UHQ1 456 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 GDAQ9Y2T3 454 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 LY75O60449 1722 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 CORO7P57737 925 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 NLRP5P59047 1200 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 CDK17Q00537 523 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 C8orf37Q96NL8 207 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 PURBQ96QR8 312 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 MMS19Q96T76 1030 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 TSGA10Q9BZW7 698 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 TTYH3Q9C0H2 523 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 FAM107BQ9H098 131 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 MAGEF1Q9HAY2 307 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 ZNHIT6Q9NWK9 470 aaKnown RBP13.61□□□□□ -0.23
CPSF7-218ENST00000537641 TRIM10Q9UDY6 481 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 MINPP1Q9UNW1 487 aa13.61□□□□□ -0.23
CPSF7-218ENST00000537641 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 PSMA7O14818 248 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 ORC4O43929 436 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
CPSF7-218ENST00000537641 SRGNP10124 158 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 PPP1R2P41236 205 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 GYG1P46976 350 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 ITIH3Q06033 890 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 IL17AQ16552 155 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 CCDC70Q6NSX1 233 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 WDR59Q6PJI9 974 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 EXOC1Q9NV70 894 aa13.6□□□□□ -0.23
CPSF7-218ENST00000537641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPSF7-218ENST00000537641 hCG_1642624A0A1W2PR95 340 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 SHOX2O60902 331 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 COBLO75128 1261 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 RHOBTB3O94955 611 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 MCM7P33993 719 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 NT5C2P49902 561 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 ZBED6P86452 979 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 FIGNQ5HY92 759 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 ZNF572Q7Z3I7 529 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 ADGRA1Q86SQ6 560 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 FAM114A1Q8IWE2 563 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 C4orf32Q8N8J7 132 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 DHTKD1Q96HY7 919 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CRACR2AQ9BSW2 395 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CUEDC2Q9H467 287 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 ABCF2Q9UG63 623 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 SBF2Q86WG5 1849 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms