RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 USP17L20D6RJB6 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USP17L24Q0WX57 530 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 USH1GQ495M9 461 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 OXER1Q8TDS5 423 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 AGTPBP1Q9UPW5 1226 aa18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
SFSWAP-206ENST00000537582 CCL15-CCL14A0A0B4J2E2 113 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 MMP1P03956 469 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 DSG3P32926 999 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 NAPAP54920 295 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 NUCB2P80303 420 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 TRIM29Q14134 588 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 CCL15Q16663 113 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 MCTP1Q6DN14 999 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 FAM173BQ6P4H8 233 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 ZNF536O15090 1300 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 SPDYE16A6NNV3 312 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 FAM155AB1AL88 458 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 VWA5AO00534 786 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 F13A1P00488 732 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 ZBTB48P10074 688 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 GTF2A2P52657 109 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 RESTQ13127 1097 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 COG2Q14746 738 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 NOM1Q5C9Z4 860 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 PTPN18Q99952 460 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 ASCC2Q9H1I8 757 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 SLC38A10Q9HBR0 1119 aa18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 RAVER2Q9HCJ3 691 aaKnown RBP18.04■□□□□ 0.48
SFSWAP-206ENST00000537582 BTBD18B2RXH4 712 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 SLC10A3P09131 477 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 CETPP11597 493 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 NLRP5P59047 1200 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 KIF23Q02241 960 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 GRM1Q13255 1194 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 NR5A1Q13285 461 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 FASTKD5Q7L8L6 764 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 FBXO11Q86XK2 927 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 REPS2Q8NFH8 660 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 P2RX7Q99572 595 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 PCDHA1Q9Y5I3 950 aa18.03■□□□□ 0.48
SFSWAP-206ENST00000537582 DIS3L2Q8IYB7 885 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 RASGRP4Q8TDF6 673 aa18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 ZIC5Q96T25 663 aa18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 ADAMTS5Q9UNA0 930 aa18.02■□□□□ 0.48
SFSWAP-206ENST00000537582 FAM205CA6NFA0 338 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 OPLAHO14841 1288 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 CYP2C8P10632 490 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 TMEM132BQ14DG7 1078 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 EARS2Q5JPH6 523 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
SFSWAP-206ENST00000537582 SMCO2A6NFE2 343 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 XBP1P17861 261 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 HTRA3P83110 453 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
SFSWAP-206ENST00000537582 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 SMCHD1A6NHR9 2005 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 PDHXO00330 501 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 ZBED4O75132 1171 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 ICAM1P05362 532 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 HERVK_113P62684 666 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 UBE2SQ16763 222 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 ZMYND12Q9H0C1 365 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 TMEM260Q9NX78 707 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 BTBD7Q9P203 1132 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 ZNF214Q9UL59 606 aaPredicted RBP18■□□□□ 0.47
SFSWAP-206ENST00000537582 RIPK3Q9Y572 518 aa18■□□□□ 0.47
SFSWAP-206ENST00000537582 COL11A1P12107 1806 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 IGF2BP3O00425 579 aaKnown RBP eCLIP17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 KRT2P35908 639 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 APLP1P51693 650 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 CCDC148Q8NFR7 591 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 TNFRSF25Q93038 417 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 TXNRD2Q9NNW7 524 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 HOMER2Q9NSB8 354 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 PCDHA4Q9UN74 947 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 MYPNQ86TC9 1320 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 A0A0G2JMZ2 1700 aa17.99■□□□□ 0.47
SFSWAP-206ENST00000537582 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 M0R2N6 131 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 CNMDO75829 334 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 ADCY7P51828 1080 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 ANKRD23Q86SG2 305 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms