RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 WDR46O15213 610 aaKnown RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 FIBPO43427 364 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 NDUFB10O96000 172 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 CYP2B6P20813 491 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 DSG3P32926 999 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 ZNF445P59923 1031 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 CYB5R4Q7L1T6 521 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 GRPEL1Q9HAV7 217 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 ANAPC4Q9UJX5 808 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 MYH8P13535 1937 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 RANBP2P49792 3224 aaKnown RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TSPY2A6NKD2 308 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TTLL1O95922 423 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TRIM32Q13049 653 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 PLS1Q14651 629 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 RASGRP2Q7LDG7 609 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
CLIP1-208ENST00000537004 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 KIF3AQ9Y496 699 aa13.83□□□□□ -0.2
CLIP1-208ENST00000537004 H3BQV1 296 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 INHAP05111 366 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 MAPK4P31152 587 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 IRF5Q13568 498 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
CLIP1-208ENST00000537004 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
CLIP1-208ENST00000537004 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
CLIP1-208ENST00000537004 KRT85P78386 507 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 AKNAD1Q5T1N1 836 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 UNC93B1Q9H1C4 597 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 CNNM2Q9H8M5 875 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 MGAMO43451 1857 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
CLIP1-208ENST00000537004 FGRP09769 529 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 CCL5P13501 91 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 UBE2HP62256 183 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 CCL14Q16627 93 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 MFSD6Q6ZSS7 791 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 TRIB2Q92519 343 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 MKL1Q969V6 931 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 TMEM87BQ96K49 555 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 MTMR7Q9Y216 660 aa13.81□□□□□ -0.2
CLIP1-208ENST00000537004 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
CLIP1-208ENST00000537004 ORC4O43929 436 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 KDM4AO75164 1064 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 CCNA1P78396 465 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 MORN1Q5T089 497 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 STAG1Q8WVM7 1258 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 USP6NLQ92738 828 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
CLIP1-208ENST00000537004 KRT23Q9C075 422 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 PPP1R9AQ9ULJ8 1098 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 VWA5AO00534 786 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 ERCC3P19447 782 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 RESTQ13127 1097 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
CLIP1-208ENST00000537004 RLFQ13129 1914 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 FDPSP14324 419 aaKnown RBP13.79□□□□□ -0.2
CLIP1-208ENST00000537004 FOSBP53539 338 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 UBXN2AP68543 259 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
CLIP1-208ENST00000537004 ZSWIM5Q9P217 1185 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 ADAMTS5Q9UNA0 930 aa13.79□□□□□ -0.2
CLIP1-208ENST00000537004 SYCE3A1L190 88 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 PTPREP23469 700 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 TMEM67Q5HYA8 995 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 MB21D1Q8N884 522 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 SOCS4Q8WXH5 440 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 KIFC2Q96AC6 838 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 ZKSCAN3Q9BRR0 538 aa13.78□□□□□ -0.2
CLIP1-208ENST00000537004 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms