RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CCZ1BP86790 482 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 CCZ1P86791 482 aaPredicted RBP15.35■□□□□ 0.05
SMG6-203ENST00000536871 KCNB1Q14721 858 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 RRAGBQ5VZM2 374 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 HOMER1Q86YM7 354 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 DCAF4Q8WV16 495 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 DBNDD1Q9H9R9 158 aa15.35■□□□□ 0.05
SMG6-203ENST00000536871 UQCRHLA0A096LP55 91 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
SMG6-203ENST00000536871 UQCRHP07919 91 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 GTF2F1P35269 517 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMG6-203ENST00000536871 MRPL12P52815 198 aaKnown RBP15.34■□□□□ 0.05
SMG6-203ENST00000536871 AMPD3Q01432 767 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 TPD52L1Q16890 204 aaPredicted RBP15.34■□□□□ 0.05
SMG6-203ENST00000536871 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 FCHSD1Q86WN1 690 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 ANKRD20A12PQ8NF67 263 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 MTMR7Q9Y216 660 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 SYNRGQ9UMZ2 1314 aa15.34■□□□□ 0.05
SMG6-203ENST00000536871 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.05
SMG6-203ENST00000536871 ATP1A3P13637 1013 aa15.33■□□□□ 0.05
SMG6-203ENST00000536871 IL17AQ16552 155 aa15.33■□□□□ 0.05
SMG6-203ENST00000536871 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.05
SMG6-203ENST00000536871 RASGRP4Q8TDF6 673 aa15.33■□□□□ 0.05
SMG6-203ENST00000536871 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.05
SMG6-203ENST00000536871 SLC26A4O43511 780 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 GCFC2P16383 781 aaKnown RBP15.33■□□□□ 0.04
SMG6-203ENST00000536871 RBM5P52756 815 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMG6-203ENST00000536871 STIM1Q13586 685 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 CUL4BQ13620 913 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 TMEM179Q6ZVK1 233 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 GRAMD1CQ8IYS0 662 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 CAMKK2Q96RR4 588 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 RWDD2AQ9UIY3 292 aa15.33■□□□□ 0.04
SMG6-203ENST00000536871 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
SMG6-203ENST00000536871 ZBTB5O15062 677 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 CCNT1O60563 726 aaKnown RBP15.32■□□□□ 0.04
SMG6-203ENST00000536871 TRAF1Q13077 416 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 CERKLQ49MI3 558 aaPredicted RBP15.32■□□□□ 0.04
SMG6-203ENST00000536871 SPECC1LQ69YQ0 1117 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 KIAA0825Q8IV33 1275 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 LRRC47Q8N1G4 583 aaKnown RBP15.32■□□□□ 0.04
SMG6-203ENST00000536871 CUL5Q93034 780 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 TMOD2Q9NZR1 351 aa15.32■□□□□ 0.04
SMG6-203ENST00000536871 RPN1P04843 607 aaKnown RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 FMR1Q06787 632 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMG6-203ENST00000536871 LETM2Q2VYF4 491 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 TBCKQ8TEA7 893 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 SLC16A10Q8TF71 515 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 PPP1R3GB7ZBB8 358 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 TNNT1P13805 278 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMG6-203ENST00000536871 RBM10P98175 930 aaKnown RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 NFIAQ12857 509 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 PAK1Q13153 545 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 PDIA5Q14554 519 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CCDC96Q2M329 555 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CABP7Q86V35 215 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CCAR2Q8N163 923 aaKnown RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 PSMD1Q99460 953 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 UBA5Q9GZZ9 404 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 KBTBD4Q9NVX7 518 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 HERC5Q9UII4 1024 aaKnown RBP15.31■□□□□ 0.04
SMG6-203ENST00000536871 HDAC9Q9UKV0 1011 aa15.31■□□□□ 0.04
SMG6-203ENST00000536871 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
SMG6-203ENST00000536871 ARMCX5Q6P1M9 558 aa15.3■□□□□ 0.04
SMG6-203ENST00000536871 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
SMG6-203ENST00000536871 TMEM60Q9H2L4 133 aa15.3■□□□□ 0.04
SMG6-203ENST00000536871 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
SMG6-203ENST00000536871 FRMPD2Q68DX3 1309 aaPredicted RBP15.3■□□□□ 0.04
SMG6-203ENST00000536871 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 H7C1D1 291 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 ARHGAP6O43182 974 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 PPIP5K2O43314 1243 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 MMP14P50281 582 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 NR1I3Q14994 352 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
SMG6-203ENST00000536871 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
SMG6-203ENST00000536871 IGSF22Q8N9C0 903 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms