RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 H0YIN7 160 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 PAGE1O75459 146 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 DDR1Q08345 913 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 ITPK1Q13572 414 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 CEP41Q9BYV8 373 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 CYP4F12Q9HCS2 524 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 STXBP5LQ9Y2K9 1186 aa9.14□□□□□ -0.95
CCDC60-203ENST00000536742 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 RNF123Q5XPI4 1314 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 H0YGN5 161 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 DDX3YO15523 660 aaKnown RBP9.13□□□□□ -0.95
CCDC60-203ENST00000536742 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 CELF2O95319 508 aaKnown RBP9.13□□□□□ -0.95
CCDC60-203ENST00000536742 GLB1P16278 677 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 LMNB2Q03252 620 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 ANKRD34AQ69YU3 496 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 Q6ZS46 218 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 PHC3Q8NDX5 983 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 TMPRSS13Q9BYE2 586 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 CBX8Q9HC52 389 aa9.13□□□□□ -0.95
CCDC60-203ENST00000536742 TTC21BQ7Z4L5 1316 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 POLRMTO00411 1230 aaKnown RBP9.12□□□□□ -0.95
CCDC60-203ENST00000536742 TRAF5O00463 557 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 HDLBPQ00341 1268 aaKnown RBP9.12□□□□□ -0.95
CCDC60-203ENST00000536742 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 PRR23CQ6ZRP0 262 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 METTL16Q86W50 562 aaKnown RBP9.12□□□□□ -0.95
CCDC60-203ENST00000536742 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 DZIP1LQ8IYY4 767 aaKnown RBP9.12□□□□□ -0.95
CCDC60-203ENST00000536742 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
CCDC60-203ENST00000536742 UBASH3BQ8TF42 649 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 RHOVQ96L33 236 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 ZFP64Q9NPA5 681 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 CACNA1AO00555 2505 aa9.12□□□□□ -0.95
CCDC60-203ENST00000536742 ITGB4P16144 1822 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
CCDC60-203ENST00000536742 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 USP48Q86UV5 1035 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 C2CD5Q86YS7 1000 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 GPC2Q8N158 579 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 AGGF1Q8N302 714 aaeCLIP9.11□□□□□ -0.95
CCDC60-203ENST00000536742 STK35Q8TDR2 534 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 PIGBQ92521 554 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 KCNB2Q92953 911 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 MIR1-1HGQ9H1L0 117 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 KBTBD4Q9NVX7 518 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 LTN1O94822 1766 aa9.11□□□□□ -0.95
CCDC60-203ENST00000536742 PCDH11XQ9BZA7 1347 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 PCDH11YQ9BZA8 1340 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 RBBP6Q7Z6E9 1792 aaKnown RBP9.1□□□□□ -0.95
CCDC60-203ENST00000536742 A0A1W2PPC1 479 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 WISP1O95388 367 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 TM4SF1P30408 202 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 USP50Q70EL3 339 aaPredicted RBP9.1□□□□□ -0.95
CCDC60-203ENST00000536742 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 ZNF654Q8IZM8 581 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 TGIF2Q9GZN2 237 aa9.1□□□□□ -0.95
CCDC60-203ENST00000536742 CCDC86Q9H6F5 360 aaKnown RBP9.1□□□□□ -0.95
CCDC60-203ENST00000536742 MAP3K19Q56UN5 1328 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 CEP290O15078 2479 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 KIF23Q02241 960 aaPredicted RBP9.09□□□□□ -0.95
CCDC60-203ENST00000536742 CAMK2GQ13555 558 aaPredicted RBP9.09□□□□□ -0.95
CCDC60-203ENST00000536742 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 FDX2Q6P4F2 183 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 RAD18Q9NS91 495 aa9.09□□□□□ -0.95
CCDC60-203ENST00000536742 DDX41Q9UJV9 622 aaKnown RBP9.09□□□□□ -0.95
CCDC60-203ENST00000536742 CNTNAP4Q9C0A0 1308 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 ZNF541Q9H0D2 1346 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-203ENST00000536742 SLC51AQ86UW1 340 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 IP6K1Q92551 441 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 CD163L1Q9NR16 1453 aa9.08□□□□□ -0.96
CCDC60-203ENST00000536742 USP42Q9H9J4 1324 aaKnown RBP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 PAPPA2Q9BXP8 1791 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 CTSBP07858 339 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 EIF4A3P38919 411 aaKnown RBP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 HUNKP57058 714 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 RGMBQ6NW40 437 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 GRIN3AQ8TCU5 1115 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 GPBAR1Q8TDU6 330 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 ZNF296Q8WUU4 475 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
CCDC60-203ENST00000536742 SUPT16HQ9Y5B9 1047 aaKnown RBP9.07□□□□□ -0.96
CCDC60-203ENST00000536742 FAM155AB1AL88 458 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms