RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 MTMR14Q8NCE2 650 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 MRFAP1L1Q96HT8 127 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 TMEM60Q9H2L4 133 aa25.81■■□□□ 1.72
HMGA2-206ENST00000536545 HERC5Q9UII4 1024 aaKnown RBP25.81■■□□□ 1.72
HMGA2-206ENST00000536545 ATF5Q9Y2D1 282 aaPredicted RBP25.81■■□□□ 1.72
HMGA2-206ENST00000536545 CLRN2A0PK11 232 aa25.8■■□□□ 1.72
HMGA2-206ENST00000536545 GOLGA6L6A8MZA4 724 aa25.8■■□□□ 1.72
HMGA2-206ENST00000536545 TCP10L2B9ZVM9 353 aa25.8■■□□□ 1.72
HMGA2-206ENST00000536545 ADCY7P51828 1080 aa25.8■■□□□ 1.72
HMGA2-206ENST00000536545 COA7Q96BR5 231 aa25.8■■□□□ 1.72
HMGA2-206ENST00000536545 LAD1O00515 517 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 JAG1P78504 1218 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 RRP1BQ14684 758 aaKnown RBP25.79■■□□□ 1.72
HMGA2-206ENST00000536545 FAM151AQ8WW52 585 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 SMARCE1Q969G3 411 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 SMTNL1A8MU46 457 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 ZBTB5O15062 677 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 TPM3P06753 285 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 SLC16A2P36021 539 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 PRPHP41219 470 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 MORC3Q14149 939 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 SLFN13Q68D06 897 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 NEK8Q86SG6 692 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 TRIML1Q8N9V2 468 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 GMCL1P1Q8NEA9 526 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 PAGE5Q96GU1 130 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 CCDC34Q96HJ3 373 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 PYM1Q9BRP8 204 aaKnown RBP25.79■■□□□ 1.72
HMGA2-206ENST00000536545 TAOK3Q9H2K8 898 aa25.79■■□□□ 1.72
HMGA2-206ENST00000536545 USP17L10C9JJH3 530 aa25.78■■□□□ 1.72
HMGA2-206ENST00000536545 CXCL9Q07325 125 aa25.78■■□□□ 1.72
HMGA2-206ENST00000536545 ORC2Q13416 577 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-206ENST00000536545 FKBP1CQ5VVH2 108 aa25.78■■□□□ 1.72
HMGA2-206ENST00000536545 ZBED3Q96IU2 234 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-206ENST00000536545 GH2P01242 217 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 TTC12Q9H892 705 aaPredicted RBP25.77■■□□□ 1.72
HMGA2-206ENST00000536545 TMEM260Q9NX78 707 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 BIN2Q9UBW5 565 aaPredicted RBP25.77■■□□□ 1.72
HMGA2-206ENST00000536545 SLC1A4P43007 532 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 RBM26Q5T8P6 1007 aaKnown RBP25.77■■□□□ 1.72
HMGA2-206ENST00000536545 JAKMIP3Q5VZ66 844 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 PDXDC2PQ6P474 469 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 DTHD1Q6ZMT9 781 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 GMCL1Q96IK5 515 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 ZNF830Q96NB3 372 aaPredicted RBP25.77■■□□□ 1.72
HMGA2-206ENST00000536545 RIC8AQ9NPQ8 531 aa25.77■■□□□ 1.72
HMGA2-206ENST00000536545 NFKBIEO00221 500 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 SMC2O95347 1197 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 MYL5Q02045 173 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 IQUBQ8NA54 791 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 TBCKQ8TEA7 893 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 HSD3B7Q9H2F3 369 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 KCNF1Q9H3M0 494 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.76■■□□□ 1.713e-6■■□□□ 12.2
HMGA2-206ENST00000536545 SYNPO2Q9UMS6 1093 aa25.76■■□□□ 1.71
HMGA2-206ENST00000536545 TPM4P67936 248 aa25.75■■□□□ 1.71
HMGA2-206ENST00000536545 DPYDQ12882 1025 aa25.75■■□□□ 1.71
HMGA2-206ENST00000536545 LETM2Q2VYF4 491 aa25.75■■□□□ 1.71
HMGA2-206ENST00000536545 NDUFB10O96000 172 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 OR52Z1P0C646 297 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 MLKLQ8NB16 471 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 F5H6K3 240 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 NEMFO60524 1076 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 CCNT1O60563 726 aaKnown RBP25.74■■□□□ 1.71
HMGA2-206ENST00000536545 TXLNAP40222 546 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 AFMP43652 599 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 CLK2P49760 499 aaKnown RBP25.74■■□□□ 1.71
HMGA2-206ENST00000536545 KLRC3Q07444 240 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 CIAPIN1Q6FI81 312 aa25.74■■□□□ 1.71
HMGA2-206ENST00000536545 PTGS1P23219 599 aa25.73■■□□□ 1.71
HMGA2-206ENST00000536545 QRICH1Q2TAL8 776 aa25.73■■□□□ 1.71
HMGA2-206ENST00000536545 FAM83AQ86UY5 434 aa25.73■■□□□ 1.71
HMGA2-206ENST00000536545 DRC7Q8IY82 874 aa25.73■■□□□ 1.71
HMGA2-206ENST00000536545 SGIP1Q9BQI5 828 aa25.73■■□□□ 1.71
HMGA2-206ENST00000536545 CUL5Q93034 780 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 VEZTQ9HBM0 779 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 DACH1Q9UI36 760 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 RAD21O60216 631 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 CDC37Q16543 378 aaPredicted RBP25.72■■□□□ 1.71
HMGA2-206ENST00000536545 CCSER1Q9C0I3 900 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 DISC1Q9NRI5 854 aa25.72■■□□□ 1.71
HMGA2-206ENST00000536545 A0A1W2PRG0 241 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 EDIL3O43854 480 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 CCDC186Q7Z3E2 898 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 JDP2Q8WYK2 163 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 GSDMAQ96QA5 445 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 MTRQ99707 1265 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 PGAP2Q9UHJ9 254 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 NRBP1Q9UHY1 535 aa25.71■■□□□ 1.71
HMGA2-206ENST00000536545 PP2D1A8MPX8 630 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 TBC1D12O60347 775 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 CASP1P29466 404 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 KARSQ15046 597 aaKnown RBP25.7■■□□□ 1.7
HMGA2-206ENST00000536545 UBE2SQ16763 222 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 CDAN1Q8IWY9 1227 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 AK8Q96MA6 479 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 NUP88Q99567 741 aaPredicted RBP25.7■■□□□ 1.7
HMGA2-206ENST00000536545 TMEM39BQ9GZU3 492 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 LTBP3Q9NS15 1303 aa25.7■■□□□ 1.7
HMGA2-206ENST00000536545 MYO1BO43795 1136 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms