RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
LMO3-214ENST00000536509 CCDC174Q6PII3 467 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
LMO3-214ENST00000536509 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.26□□□□□ -0.29
LMO3-214ENST00000536509 ABHD16BQ9H3Z7 469 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 SPC25Q9HBM1 224 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 MCM3APO60318 1980 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
LMO3-214ENST00000536509 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
LMO3-214ENST00000536509 KLHDC9Q8NEP7 349 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 CHST13Q8NET6 341 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 APPBP2Q92624 585 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 MKL1Q969V6 931 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 GLT1D1Q96MS3 346 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
LMO3-214ENST00000536509 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 SNAI1O95863 264 aaPredicted RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 NDUFB10O96000 172 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 TIMP1P01033 207 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 FOSL2P15408 326 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 ITGB8P26012 769 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 PPP4R3BQ5MIZ7 849 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 CCSAPQ6IQ19 270 aaPredicted RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
LMO3-214ENST00000536509 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
LMO3-214ENST00000536509 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
LMO3-214ENST00000536509 TTLL1O95922 423 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 NBR1Q14596 966 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 KCNA10Q16322 511 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 NUP88Q99567 741 aaPredicted RBP13.23□□□□□ -0.29
LMO3-214ENST00000536509 NACAP1Q9BZK3 213 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
LMO3-214ENST00000536509 RIPK3Q9Y572 518 aa13.23□□□□□ -0.29
LMO3-214ENST00000536509 PLIN4Q96Q06 1357 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
LMO3-214ENST00000536509 CHGBP05060 677 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
LMO3-214ENST00000536509 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
LMO3-214ENST00000536509 TIE1P35590 1138 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 TDO2P48775 406 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 GJA9P57773 515 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 NKX3-2P78367 333 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 PDE4BQ07343 736 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMO3-214ENST00000536509 MFSD5Q6N075 450 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 CPXCR1Q8N123 301 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 MYLIPQ8WY64 445 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 KIFC2Q96AC6 838 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 SEZ6LQ9BYH1 1024 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 UPF3AQ9H1J1 476 aaKnown RBP13.22□□□□□ -0.29
LMO3-214ENST00000536509 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
LMO3-214ENST00000536509 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
LMO3-214ENST00000536509 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 GPAA1O43292 621 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 APPP05067 770 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 DNAJB2P25686 324 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 CDK7P50613 346 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 EPHB4P54760 987 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 TMEM199Q8N511 208 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 CEP95Q96GE4 821 aa13.21□□□□□ -0.29
LMO3-214ENST00000536509 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
LMO3-214ENST00000536509 ASB14A6NK59 587 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 ARVCFO00192 962 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
LMO3-214ENST00000536509 CABYRO75952 493 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 ASGR1P07306 291 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 BMP3P12645 472 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 STAT2P52630 851 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
LMO3-214ENST00000536509 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
LMO3-214ENST00000536509 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms