RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ERVK-9P63128 1117 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 MYL5Q02045 173 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 TRDNQ13061 729 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 NAA30Q147X3 362 aaPredicted RBP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 ZRSR1Q15695 479 aaKnown RBP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 CC2D2BQ6DHV5 1058 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 KRBA2Q6ZNG9 492 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 BRINP3Q76B58 766 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 DNAJC10Q8IXB1 793 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 FAM89AQ96GI7 184 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 AIFM3Q96NN9 605 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 LY9Q9HBG7 655 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 TRMT1Q9NXH9 659 aaKnown RBP6.57□□□□□ -1.36
VPS33A-203ENST00000536212 TMOD3Q9NYL9 352 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 DENND2AQ9ULE3 1009 aa6.57□□□□□ -1.36
VPS33A-203ENST00000536212 PHLPP2Q6ZVD8 1323 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 ZNF532Q9HCE3 1301 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 GOLGA8AA7E2F4 631 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 B4E1Z4 1266 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 M0R2N6 131 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 ZBTB43O43298 467 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 RANBP6O60518 1105 aaKnown RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 PDE8AO60658 829 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 CLSTN1O94985 981 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 STARD3NLO95772 234 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 H2AFXP16104 143 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 IFNAR1P17181 557 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 ERCC3P19447 782 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 MARCKSP29966 332 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 IARSP41252 1262 aaKnown RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 PHKA1P46020 1223 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 FAM193AP78312 1265 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 TBX2Q13207 712 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 HLFQ16534 295 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 CT47A1Q5JQC4 288 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 SLC9C2Q5TAH2 1124 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 NT5DC1Q5TFE4 455 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 LDHAL6AQ6ZMR3 332 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 SV2AQ7L0J3 742 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 FOXP4Q8IVH2 680 aaPredicted RBP6.56□□□□□ -1.36
VPS33A-203ENST00000536212 VSTM4Q8IW00 320 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 STAG1Q8WVM7 1258 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 PIGBQ92521 554 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 WASF1Q92558 559 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 GREM2Q9H772 168 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 TIAM2Q8IVF5 1701 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 TOGARAM1Q9Y4F4 1720 aa6.56□□□□□ -1.36
VPS33A-203ENST00000536212 UBN2Q6ZU65 1347 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 MROH5Q6ZUA9 1318 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 BIN1O00499 593 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 IRS4O14654 1257 aaPredicted RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 PRMT3O60678 531 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ITGB2P05107 769 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 CYP19A1P11511 503 aaPredicted RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ATP1A3P13637 1013 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ZNF18P17022 549 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 BMP6P22004 513 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 UBASH3AP57075 661 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 FBXO38Q6PIJ6 1188 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 TRIM65Q6PJ69 517 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 LYPD4Q6UWN0 246 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 RAB11FIP4Q86YS3 637 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 CREBRFQ8IUR6 639 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 TMEM139Q8IV31 216 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 REXO1L1PQ8IX06 675 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 CCDC116Q8IYX3 515 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ZNF34Q8IZ26 560 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 IFNL3Q8IZI9 196 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 KRT222Q8N1A0 295 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 STK11IPQ8N1F8 1099 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 SYNE4Q8N205 404 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 VWA5B2Q8N398 1253 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 TRIML1Q8N9V2 468 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 C1orf216Q8TAB5 229 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 ENOX1Q8TC92 643 aaKnown RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 LPIN2Q92539 896 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 DPF2Q92785 391 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 HINFPQ9BQA5 517 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 SRRTQ9BXP5 876 aaKnown RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 KRT23Q9C075 422 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 FOXP1Q9H334 677 aaPredicted RBP6.55□□□□□ -1.36
VPS33A-203ENST00000536212 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
VPS33A-203ENST00000536212 EPB41L4AQ9HCS5 686 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms