RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZNF543Q08ER8 600 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 KCTD2Q14681 263 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 CHURC1Q8WUH1 139 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 ANKS1AQ92625 1134 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 TTC14Q96N46 770 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 CPVLQ9H3G5 476 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 GPCPD1Q9NPB8 672 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 HOMER2Q9NSB8 354 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 CTNNA3Q9UI47 895 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 COL6A1P12109 1028 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 IKQ13123 557 aaPredicted RBP19.27■□□□□ 0.68
ATL3-202ENST00000535789 SEC23AQ15436 765 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 MUM1L1Q5H9M0 696 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 ANO1Q5XXA6 986 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 DGKHQ86XP1 1220 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 RUFY2Q8WXA3 655 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 ZSCAN10Q96SZ4 725 aaPredicted RBP19.27■□□□□ 0.68
ATL3-202ENST00000535789 TINF2Q9BSI4 451 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 LSG1Q9H089 658 aaKnown RBP19.27■□□□□ 0.68
ATL3-202ENST00000535789 PCDH10Q9P2E7 1040 aa19.27■□□□□ 0.68
ATL3-202ENST00000535789 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
ATL3-202ENST00000535789 KIAA1217Q5T5P2 1943 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 FDX1P10109 184 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 CHST13Q8NET6 341 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 MAP4K1Q92918 833 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
ATL3-202ENST00000535789 RNF146Q9NTX7 359 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 LAMA3Q16787 3333 aa19.26■□□□□ 0.67
ATL3-202ENST00000535789 H0YGN5 161 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 SNAI1O95863 264 aaPredicted RBP19.25■□□□□ 0.67
ATL3-202ENST00000535789 ZNF865P0CJ78 1059 aaPredicted RBP19.25■□□□□ 0.67
ATL3-202ENST00000535789 CAPN2P17655 700 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 CNGA1P29973 690 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 BMP2KLQ5H9B9 411 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 NECAB2Q7Z6G3 386 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 PNMA1Q8ND90 353 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 LENG1Q96BZ8 264 aaPredicted RBP19.25■□□□□ 0.67
ATL3-202ENST00000535789 ESYT1Q9BSJ8 1104 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 KRT23Q9C075 422 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 ACAD9Q9H845 621 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 SENP2Q9HC62 589 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 SLC5A4Q9NY91 659 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 RBM8AQ9Y5S9 174 aaKnown RBP19.25■□□□□ 0.67
ATL3-202ENST00000535789 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
ATL3-202ENST00000535789 TRIOBPQ9H2D6 2365 aa19.25■□□□□ 0.67
ATL3-202ENST00000535789 SEPT4O43236 478 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 ADCY6O43306 1168 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 ICAM1P05362 532 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 ALAS1P13196 640 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 NT5C2P49902 561 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 ANTXR2P58335 489 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 CNTN2Q02246 1040 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 MAMDC4Q6UXC1 1216 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 C11orf49Q9H6J7 331 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 CNNM2Q9H8M5 875 aa19.24■□□□□ 0.67
ATL3-202ENST00000535789 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
ATL3-202ENST00000535789 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
ATL3-202ENST00000535789 SZT2Q5T011 3432 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 E7EWF7 191 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 TRERF1Q96PN7 1200 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 PURBQ96QR8 312 aaKnown RBP19.23■□□□□ 0.67
ATL3-202ENST00000535789 HTATIP2Q9BUP3 242 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 KATNBL1Q9H079 304 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 FBXO40Q9UH90 709 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 SYNGAP1Q96PV0 1343 aa19.23■□□□□ 0.67
ATL3-202ENST00000535789 SOWAHBA6NEL2 793 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 NFIBO00712 420 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 SLC35G1Q2M3R5 365 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
ATL3-202ENST00000535789 ANKRD35Q8N283 1001 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 DPF3Q92784 378 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
ATL3-202ENST00000535789 MSCO60682 206 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 TKFCQ3LXA3 575 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 ZNF467Q7Z7K2 595 aaPredicted RBP19.21■□□□□ 0.67
ATL3-202ENST00000535789 CLEC4DQ8WXI8 215 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 CYP39A1Q9NYL5 469 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
ATL3-202ENST00000535789 LRRC26Q2I0M4 334 aa19.2■□□□□ 0.66
ATL3-202ENST00000535789 GJC2Q5T442 439 aaPredicted RBP19.2■□□□□ 0.66
ATL3-202ENST00000535789 ARMCX2Q7L311 632 aa19.2■□□□□ 0.66
ATL3-202ENST00000535789 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
ATL3-202ENST00000535789 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
ATL3-202ENST00000535789 MSL3Q8N5Y2 521 aaKnown RBP19.2■□□□□ 0.66
ATL3-202ENST00000535789 UBAC1Q9BSL1 405 aa19.2■□□□□ 0.66
ATL3-202ENST00000535789 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.2■□□□□ 0.66
ATL3-202ENST00000535789 LAMA2P24043 3122 aaKnown RBP19.19■□□□□ 0.66
ATL3-202ENST00000535789 IRX5P78411 483 aaPredicted RBP19.19■□□□□ 0.66
ATL3-202ENST00000535789 CCDC178Q5BJE1 867 aa19.19■□□□□ 0.66
ATL3-202ENST00000535789 GPATCH4Q5T3I0 446 aaKnown RBP19.19■□□□□ 0.66
ATL3-202ENST00000535789 IFIT1BQ5T764 474 aaKnown RBP19.19■□□□□ 0.66
ATL3-202ENST00000535789 SLC30A10Q6XR72 485 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms