RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 TCEAL5Q5H9L2 206 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 TATDN1Q6P1N9 297 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 SEMA4AQ9H3S1 761 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 SCN5AQ14524 2016 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 CEP295Q9C0D2 2601 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 PGK2P07205 417 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 SUPT20HL2P0C7V6 817 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 MECOMQ03112 1051 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 SPTY2D1Q68D10 685 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-214ENST00000535222 DEFB128Q7Z7B8 93 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 ZNF467Q7Z7K2 595 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-214ENST00000535222 NCAPG2Q86XI2 1143 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
CPSF7-214ENST00000535222 MAGEB6Q8N7X4 407 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 ALDH8A1Q9H2A2 487 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-214ENST00000535222 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
CPSF7-214ENST00000535222 HELZ2Q9BYK8 2649 aaKnown RBP9.33□□□□□ -0.92
CPSF7-214ENST00000535222 FRYQ5TBA9 3013 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 KDM4AO75164 1064 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 GH2P01242 217 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 IQCF3P0C7M6 154 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 ICAM3P32942 547 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 WDR5P61964 334 aaKnown RBP9.32□□□□□ -0.92
CPSF7-214ENST00000535222 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
CPSF7-214ENST00000535222 DLX2Q07687 328 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-214ENST00000535222 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-214ENST00000535222 ACVR2BQ13705 512 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 CXCL17Q6UXB2 119 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 ACER1Q8TDN7 264 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 SUCLG2Q96I99 432 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 MMP19Q99542 508 aa9.32□□□□□ -0.92
CPSF7-214ENST00000535222 NSUN3Q9H649 340 aaKnown RBP9.32□□□□□ -0.92
CPSF7-214ENST00000535222 COL11A1P12107 1806 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-214ENST00000535222 DNAJC25-GNG10A0A024R161 153 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 H3BNC9 293 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 PDGFBP01127 241 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-214ENST00000535222 ZYXQ15942 572 aaKnown RBP9.31□□□□□ -0.92
CPSF7-214ENST00000535222 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 RIOX2Q8IUF8 465 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 KIAA2013Q8IYS2 634 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 ANKRD44Q8N8A2 993 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 TMEM105Q8N8V8 129 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 NSUN4Q96CB9 384 aaKnown RBP9.31□□□□□ -0.92
CPSF7-214ENST00000535222 MSLNLQ96KJ4 702 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 KATNBL1Q9H079 304 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 ABHD16BQ9H3Z7 469 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 SH2B1Q9NRF2 756 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-214ENST00000535222 CLDND1Q9NY35 253 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 MTUS1Q9ULD2 1270 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 CACNA1FO60840 1977 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 ASTN1O14525 1302 aa9.31□□□□□ -0.92
CPSF7-214ENST00000535222 ALDH1L1O75891 902 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 LDHCP07864 332 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 PHKA1P46020 1223 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 KCNJ6P48051 423 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 RASGRF1Q13972 1273 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 GPNMBQ14956 572 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 TMEM132BQ14DG7 1078 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 CCDC146Q8IYE0 955 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-214ENST00000535222 SAMD11Q96NU1 681 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 FEZ1Q99689 392 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 C17orf80Q9BSJ5 609 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
CPSF7-214ENST00000535222 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
CPSF7-214ENST00000535222 EYA2O00167 538 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 LMNAP02545 664 aaKnown RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 CYP2C9P11712 490 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 PPP4CP60510 307 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 DEFB103AP81534 67 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 HTRA4P83105 476 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 BEX3Q00994 111 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 PTPN21Q16825 1174 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 EPC2Q52LR7 807 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 ATG9AQ7Z3C6 839 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 TMCO2Q7Z6W1 182 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 TEX11Q8IYF3 940 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 ZBED2Q9BTP6 218 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 BICC1Q9H694 974 aaKnown RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 TRMT13Q9NUP7 481 aaKnown RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 C9orf78Q9NZ63 289 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 CD207Q9UJ71 328 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 ZHX1Q9UKY1 873 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-214ENST00000535222 PCDHGC5Q9Y5F6 944 aa9.29□□□□□ -0.92
CPSF7-214ENST00000535222 CXCL10P02778 98 aa9.28□□□□□ -0.92
CPSF7-214ENST00000535222 ADRB1P08588 477 aa9.28□□□□□ -0.92
CPSF7-214ENST00000535222 NBPF7P0C2Y1 421 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-214ENST00000535222 SDHBP21912 280 aa9.28□□□□□ -0.92
CPSF7-214ENST00000535222 GUCY1A2P33402 732 aa9.28□□□□□ -0.92
CPSF7-214ENST00000535222 COPB2P35606 906 aa9.28□□□□□ -0.92
CPSF7-214ENST00000535222 RFX5P48382 616 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms