RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 MAP3K14Q99558 947 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 DDTLA6NHG4 134 aaPredicted RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 ENO4A6NNW6 628 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 N4BP1O75113 896 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 TAL1P17542 331 aaPredicted RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 HNRNPH1P31943 449 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 NEDD9Q14511 834 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CLIC6Q96NY7 704 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 NACAP1Q9BZK3 213 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 ZNF277Q9NRM2 450 aaPredicted RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 A0A1B0GUA9 196 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 SASH3O75995 380 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 USP5P45974 858 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 SBK1Q52WX2 424 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 FAM204AQ9H8W3 233 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 PCDHA7Q9UN72 937 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 ROBO3Q96MS0 1386 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 H2AFXP16104 143 aaPredicted RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 TCP10Q12799 353 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CRNKL1Q9BZJ0 848 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 KRT23Q9C075 422 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CD248Q9HCU0 757 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 ATP8A2Q9NTI2 1148 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 SPATS2LQ9NUQ6 558 aaKnown RBP10.17□□□□□ -0.78
SF3B2-216ENST00000534765 MRFAP1Q9Y605 127 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 CNTNAP5Q8WYK1 1306 aa10.17□□□□□ -0.78
SF3B2-216ENST00000534765 KINO60870 393 aaKnown RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 FMNL1O95466 1100 aaPredicted RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 SERPINC1P01008 464 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 ELF1P32519 619 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 C8orf76Q96K31 380 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 PARD6BQ9BYG5 372 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 FAM198AQ9UFP1 575 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 H3BQF6 201 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 MARCKSP29966 332 aaPredicted RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 CDK8P49336 464 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 CORO7P57737 925 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 GOLGA8FQ08AF8 430 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 GOLGA8DPQ0D2H9 430 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 FER1L6Q2WGJ9 1857 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 USP49Q70CQ1 688 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 ZC3H12CQ9C0D7 883 aaKnown RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 MAD2L2Q9UI95 211 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 MYH4Q9Y623 1939 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 H0YIN7 160 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 ORC4O43929 436 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 PTPAQ15257 358 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
SF3B2-216ENST00000534765 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 FKBP15Q5T1M5 1219 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 PPP1R13BQ96KQ4 1090 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 COA1Q9GZY4 146 aa10.16□□□□□ -0.78
SF3B2-216ENST00000534765 A0A1B0GVL5 298 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 AKR1B1P15121 316 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 IFNAR1P17181 557 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 GABPAQ06546 454 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CEP57L1Q8IYX8 460 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 LINC00301Q8NCQ3 95 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 ENGASEQ8NFI3 743 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 HINFPQ9BQA5 517 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 IFNKQ9P0W0 207 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 ZEB2O60315 1214 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 AP1G2O75843 785 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 RTN1Q16799 776 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 AFAP1L1Q8TED9 768 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 ESR2Q92731 530 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 GOLGA1Q92805 767 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 PRMT6Q96LA8 375 aaPredicted RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CNNM2Q9H8M5 875 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 ASTN2O75129 1339 aaPredicted RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 RAD17O75943 681 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 TBC1D8O95759 1140 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 IFIT1BQ5T764 474 aaKnown RBP10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 HDXQ7Z353 690 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CEP95Q96GE4 821 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 CRACR2AQ9BSW2 395 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 SUGCTQ9HAC7 445 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 PCDHB6Q9Y5E3 794 aa10.15□□□□□ -0.78
SF3B2-216ENST00000534765 EZRP15311 586 aaKnown RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 NDUFA8P51970 172 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms