RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CYP2C19P33261 490 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 EXOSC10Q01780 885 aaKnown RBP15.65■□□□□ 0.1
CMTM1-219ENST00000533953 KCTD2Q14681 263 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 SART3Q15020 963 aaKnown RBP15.65■□□□□ 0.1
CMTM1-219ENST00000533953 TSGA10IPQ3SY00 556 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 ADGRF4Q8IZF3 695 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 KCNB2Q92953 911 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 APBA2Q99767 749 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 RNF208Q9H0X6 261 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 RANBP17Q9H2T7 1088 aaKnown RBP15.65■□□□□ 0.1
CMTM1-219ENST00000533953 RNF146Q9NTX7 359 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 MAD2L2Q9UI95 211 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 CCPG1Q9ULG6 757 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 PLXNB2O15031 1838 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 PARP14Q460N5 1801 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 KLRF2D3W0D1 207 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 DHX16O60231 1041 aaKnown RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 HMGCRP04035 888 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 UBXN2AP68543 259 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 CACNB2Q08289 660 aaPredicted RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 TROAPQ12815 778 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 PRAMEF19Q5SWL8 479 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 GPATCH4Q5T3I0 446 aaKnown RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 NFXL1Q6ZNB6 911 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 CCDC144CPQ8IYA2 1237 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 PIBF1Q8WXW3 757 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 DDX11Q96FC9 970 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 JAKMIP1Q96N16 626 aaKnown RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 PURBQ96QR8 312 aaKnown RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
CMTM1-219ENST00000533953 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
CMTM1-219ENST00000533953 PALM3A6NDB9 673 aaPredicted RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 ICAM1P05362 532 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 HOXC6P09630 235 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 FDX1P10109 184 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 CCND3P30281 292 aaPredicted RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 OAZ1P54368 228 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 CNTN2Q02246 1040 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 GRM4Q14833 912 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 ASPRV1Q53RT3 343 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 DHX32Q7L7V1 743 aaKnown RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 CATIPQ7Z7H3 387 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 ZNF654Q8IZM8 581 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 CMTR1Q8N1G2 835 aaKnown RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 ANKRD35Q8N283 1001 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 TMEM87BQ96K49 555 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 JMJD4Q9H9V9 463 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
CMTM1-219ENST00000533953 COL11A1P12107 1806 aaPredicted RBP15.63■□□□□ 0.09
CMTM1-219ENST00000533953 NFIBO00712 420 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 CDC37Q16543 378 aaPredicted RBP15.62■□□□□ 0.09
CMTM1-219ENST00000533953 ZNF792Q3KQV3 632 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 USH1GQ495M9 461 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 ABRAQ8N0Z2 381 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 TRPV1Q8NER1 839 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 CHST13Q8NET6 341 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 DEFB118Q96PH6 123 aa15.62■□□□□ 0.09
CMTM1-219ENST00000533953 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 CYTH3O43739 400 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 COPB2P35606 906 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 KRT32Q14532 448 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 CLEC4DQ8WXI8 215 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 TBC1D5Q92609 795 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 FGD4Q96M96 766 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.61■□□□□ 0.09
CMTM1-219ENST00000533953 ACAD9Q9H845 621 aa15.61■□□□□ 0.09
CMTM1-219ENST00000533953 A1CFQ9NQ94 594 aaKnown RBP15.61■□□□□ 0.09
CMTM1-219ENST00000533953 DNAJC25-GNG10A0A024R161 153 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 PPP1R11O60927 126 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-219ENST00000533953 PLEKHA8P1O95397 391 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 IGHA2P01877 340 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 MAP3K21Q5TCX8 1036 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 MFSD14CQ5VZR4 134 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 HOMER1Q86YM7 354 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 CCDC82Q8N4S0 544 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 SHISA4Q96DD7 197 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 PIGSQ96S52 555 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 LARP6Q9BRS8 491 aaKnown RBP15.6■□□□□ 0.09
CMTM1-219ENST00000533953 HMX1Q9NP08 348 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-219ENST00000533953 GTF3C3Q9Y5Q9 886 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
CMTM1-219ENST00000533953 hCG_1642624A0A1W2PR95 340 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 SOWAHBA6NEL2 793 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 GJB1P08034 283 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
CMTM1-219ENST00000533953 CNGA1P29973 690 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 LIFRP42702 1097 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 BAATQ14032 418 aaPredicted RBP15.59■□□□□ 0.09
CMTM1-219ENST00000533953 TKFCQ3LXA3 575 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 ANO1Q5XXA6 986 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 Q6ZUG5 572 aa15.59■□□□□ 0.09
CMTM1-219ENST00000533953 TRMT44Q8IYL2 757 aaKnown RBP15.59■□□□□ 0.09
CMTM1-219ENST00000533953 U2AF1L4Q8WU68 220 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms