RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 SKOR2Q2VWA4 1001 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 RGMBQ6NW40 437 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 ANKRD23Q86SG2 305 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZNF408Q9H9D4 720 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 NOL7Q9UMY1 257 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 ATP2A1O14983 1001 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 PTMSP20962 102 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 GJB2P29033 226 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 OAZ1P54368 228 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 PKN1Q16512 942 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CCDC102AQ96A19 550 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 ESYT2A0FGR8 921 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RASSF10A6NK89 507 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 HUNKP57058 714 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZNF236Q9UL36 1845 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 FAM155AB1AL88 458 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 JAK2O60674 1132 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 APLP1P51693 650 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 HMGCS2P54868 508 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 PRPF38AQ8NAV1 312 aaKnown RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 TMEM232C9JQI7 657 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZBTB5O15062 677 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 SCG2P13521 617 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 INHBEP58166 350 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 GALNT17Q6IS24 598 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 KCTD1Q719H9 257 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 RAB11FIP4Q86YS3 637 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
CAPRIN1-215ENST00000533657 DSG3P32926 999 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 GHRHRQ02643 423 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 REPS2Q8NFH8 660 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 SLC26A6Q9BXS9 759 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 GOLGA8HP0CJ92 632 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 TTBK2Q6IQ55 1244 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 ZNF771Q7L3S4 317 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 BARHL2Q9NY43 387 aa11.83□□□□□ -0.52
CAPRIN1-215ENST00000533657 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 PHKBQ93100 1093 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 SLC38A10Q9HBR0 1119 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 SEC63Q9UGP8 760 aaKnown RBP11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 XBP1P17861 261 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 NUCB2P80303 420 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 COG2Q14746 738 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
CAPRIN1-215ENST00000533657 STXBP3O00186 592 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 OSBPP22059 807 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 CDC37Q16543 378 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 SPICE1Q8N0Z3 855 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ALG1Q9BT22 464 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ABCB11O95342 1321 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 CLGNO14967 610 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ICAM1P05362 532 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 COPB2P35606 906 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 PIGSQ96S52 555 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 PHF20Q9BVI0 1012 aa11.81□□□□□ -0.52
CAPRIN1-215ENST00000533657 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
CAPRIN1-215ENST00000533657 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms