RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 DNAJC25-GNG10A0A024R161 153 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 SNAI1O95863 264 aaPredicted RBP10.34□□□□□ -0.75
COPB1-210ENST00000533533 TDO2P48775 406 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 KCNA10Q16322 511 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 SNRNP48Q6IEG0 339 aaKnown RBP10.34□□□□□ -0.75
COPB1-210ENST00000533533 CCSAPQ6IQ19 270 aaPredicted RBP10.34□□□□□ -0.75
COPB1-210ENST00000533533 MAMDC4Q6UXC1 1216 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 STK11IPQ8N1F8 1099 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 STRBPQ96SI9 672 aaKnown RBP10.34□□□□□ -0.75
COPB1-210ENST00000533533 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
COPB1-210ENST00000533533 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 DIAPH3Q9NSV4 1193 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 NYAP2Q9P242 653 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 RIPK3Q9Y572 518 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 CHD7Q9P2D1 2997 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 MINDY4BA8MYZ0 360 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 F5H6K3 240 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 NDUFB10O96000 172 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 TIMP1P01033 207 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 GNAT2P19087 354 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 RASA1P20936 1047 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 DNAJB2P25686 324 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 KLRC3Q07444 240 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 SBK1Q52WX2 424 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 ZMYM1Q5SVZ6 1142 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 ZNF467Q7Z7K2 595 aaPredicted RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 PRPF38AQ8NAV1 312 aaKnown RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 FAM227BQ96M60 508 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 NACAP1Q9BZK3 213 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 MKNK2Q9HBH9 465 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 ZHX1Q9UKY1 873 aaPredicted RBP10.33□□□□□ -0.76
COPB1-210ENST00000533533 TBX21Q9UL17 535 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 ELP1O95163 1332 aa10.33□□□□□ -0.76
COPB1-210ENST00000533533 MYADML2A6NDP7 307 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 ZBED4O75132 1171 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 SDSP20132 328 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
COPB1-210ENST00000533533 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 CDK7P50613 346 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 GRIN2CQ14957 1233 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 GIMAP6Q6P9H5 292 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 CWC27Q6UX04 472 aaKnown RBP10.32□□□□□ -0.76
COPB1-210ENST00000533533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
COPB1-210ENST00000533533 SKAP1Q86WV1 359 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 CPXCR1Q8N123 301 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 PCSK9Q8NBP7 692 aaKnown RBP10.32□□□□□ -0.76
COPB1-210ENST00000533533 GLT1D1Q96MS3 346 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 NAPBQ9H115 298 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 ABHD16BQ9H3Z7 469 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
COPB1-210ENST00000533533 MROH7Q68CQ1 1323 aa10.32□□□□□ -0.76
COPB1-210ENST00000533533 IGKV6D-41A0A0C4DH26 115 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 A0A0D9SFI3 127 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 HAX1O00165 279 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 ADCY6O43306 1168 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 ASGR1P07306 291 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 C6orf222P0C671 652 aaPredicted RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 GSPT1P15170 499 aaKnown RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 PPIGQ13427 754 aaKnown RBP eCLIP10.31□□□□□ -0.763e-7■□□□□ 8.2
COPB1-210ENST00000533533 CCDC144BQ3MJ40 725 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 MCMDC2Q4G0Z9 681 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 C16orf59Q7L2K0 433 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 ANKRD35Q8N283 1001 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 MKL1Q969V6 931 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 KIFC2Q96AC6 838 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 VTI1AQ96AJ9 217 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 FGD4Q96M96 766 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
COPB1-210ENST00000533533 UPF3AQ9H1J1 476 aaKnown RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 SPC25Q9HBM1 224 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 SLC38A10Q9HBR0 1119 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 RAVER2Q9HCJ3 691 aaKnown RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 HELLSQ9NRZ9 838 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 FBXO40Q9UH90 709 aa10.31□□□□□ -0.76
COPB1-210ENST00000533533 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
COPB1-210ENST00000533533 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 GBF1Q92538 1859 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
COPB1-210ENST00000533533 ARVCFO00192 962 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 HIP1O00291 1037 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 OAZ1P54368 228 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 GJA9P57773 515 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms