RNA–Protein interactions for RNA: ENST00000533498.1

RPL38-206, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RPL38, Length 532 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-206ENST00000533498 ANKRD35Q8N283 1001 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 PCSK9Q8NBP7 692 aaKnown RBP13.9□□□□□ -0.18
RPL38-206ENST00000533498 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
RPL38-206ENST00000533498 GMCL1Q96IK5 515 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 GUCD1Q96NT3 240 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 NAPBQ9H115 298 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 STARD7Q9NQZ5 370 aa13.9□□□□□ -0.18
RPL38-206ENST00000533498 DCDC2CA8MYV0 355 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 BMP3P12645 472 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 RAG1P15918 1043 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 NKX3-2P78367 333 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
RPL38-206ENST00000533498 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.89□□□□□ -0.19
RPL38-206ENST00000533498 ZHX1Q9UKY1 873 aaPredicted RBP13.89□□□□□ -0.19
RPL38-206ENST00000533498 LRRC37A2A6NM11 1700 aa13.89□□□□□ -0.19
RPL38-206ENST00000533498 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
RPL38-206ENST00000533498 PRDM1O75626 825 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 FPGSQ05932 587 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 PPARAQ07869 468 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 ACVR2BQ13705 512 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 ZMYM1Q5SVZ6 1142 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
RPL38-206ENST00000533498 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
RPL38-206ENST00000533498 SLC1A4P43007 532 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 GJA9P57773 515 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 TFAP4Q01664 338 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 FAAP100Q0VG06 881 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 KCNA10Q16322 511 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
RPL38-206ENST00000533498 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
RPL38-206ENST00000533498 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
RPL38-206ENST00000533498 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
RPL38-206ENST00000533498 RAVER2Q9HCJ3 691 aaKnown RBP13.87□□□□□ -0.19
RPL38-206ENST00000533498 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 CHD9Q3L8U1 2897 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 LCTP09848 1927 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 TMEM232C9JQI7 657 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 TIMP1P01033 207 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 C6orf222P0C671 652 aaPredicted RBP13.86□□□□□ -0.19
RPL38-206ENST00000533498 ITGB8P26012 769 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 PDE4AP27815 886 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 STAG1Q8WVM7 1258 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 LENG1Q96BZ8 264 aaPredicted RBP13.86□□□□□ -0.19
RPL38-206ENST00000533498 FGD4Q96M96 766 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 TBX21Q9UL17 535 aa13.86□□□□□ -0.19
RPL38-206ENST00000533498 ASB14A6NK59 587 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 TSPY2A6NKD2 308 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 TRIM6-TRIM34B2RNG4 842 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 ASGR1P07306 291 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 SLC4A3P48751 1232 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 CDK7P50613 346 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 RCSD1Q6JBY9 416 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
RPL38-206ENST00000533498 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 CCDC136Q96JN2 1154 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 FAM161BQ96MY7 647 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
RPL38-206ENST00000533498 CDX2Q99626 313 aaPredicted RBP13.85□□□□□ -0.19
RPL38-206ENST00000533498 KATNBL1Q9H079 304 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 STX8Q9UNK0 236 aa13.85□□□□□ -0.19
RPL38-206ENST00000533498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPL38-206ENST00000533498 LOC102724159A0A0B4J2E5 919 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
RPL38-206ENST00000533498 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
RPL38-206ENST00000533498 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
RPL38-206ENST00000533498 ARVCFO00192 962 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 CABYRO75952 493 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 NOVP48745 357 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 PPIGQ13427 754 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPL38-206ENST00000533498 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
RPL38-206ENST00000533498 MFSD5Q6N075 450 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
RPL38-206ENST00000533498 RNF146Q9NTX7 359 aa13.84□□□□□ -0.19
RPL38-206ENST00000533498 PNMA2Q9UL42 364 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms