RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 GSPT1P15170 499 aaKnown RBP22.37■■□□□ 1.17
SSH3-209ENST00000532600 BMP8BP34820 402 aa22.37■■□□□ 1.17
SSH3-209ENST00000532600 ARRDC4Q8NCT1 418 aa22.37■■□□□ 1.17
SSH3-209ENST00000532600 CCDC136Q96JN2 1154 aa22.37■■□□□ 1.17
SSH3-209ENST00000532600 ISY1Q9ULR0 285 aaKnown RBP22.37■■□□□ 1.17
SSH3-209ENST00000532600 CTDP1Q9Y5B0 961 aaPredicted RBP22.37■■□□□ 1.17
SSH3-209ENST00000532600 SYNGAP1Q96PV0 1343 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 FDX1P10109 184 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 CNTN2Q02246 1040 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 CENPQQ7L2Z9 268 aaPredicted RBP22.36■■□□□ 1.17
SSH3-209ENST00000532600 ZNF467Q7Z7K2 595 aaPredicted RBP22.36■■□□□ 1.17
SSH3-209ENST00000532600 SKAP1Q86WV1 359 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 ANKRD35Q8N283 1001 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 MSL3Q8N5Y2 521 aaKnown RBP22.36■■□□□ 1.17
SSH3-209ENST00000532600 FBXO40Q9UH90 709 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 LAMA3Q16787 3333 aa22.36■■□□□ 1.17
SSH3-209ENST00000532600 LCTP09848 1927 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 A0A1W2PPC1 479 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 ADCY6O43306 1168 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 PGK1P00558 417 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 TOP1P11387 765 aaKnown RBP22.35■■□□□ 1.17
SSH3-209ENST00000532600 SLC16A2P36021 539 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 RTP1P59025 263 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
SSH3-209ENST00000532600 CCDC174Q6PII3 467 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 MFSD6Q6ZSS7 791 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 DCAF4Q8WV16 495 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 A1CFQ9NQ94 594 aaKnown RBP22.35■■□□□ 1.17
SSH3-209ENST00000532600 XPNPEP3Q9NQH7 507 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 DIAPH3Q9NSV4 1193 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
SSH3-209ENST00000532600 ASTN1O14525 1302 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 MYCNP04198 464 aaPredicted RBP22.34■■□□□ 1.17
SSH3-209ENST00000532600 RARBP10826 455 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 AKR1A1P14550 325 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 ADCYAP1R1P41586 468 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 MFAP1P55081 439 aaKnown RBP22.34■■□□□ 1.17
SSH3-209ENST00000532600 SNX17Q15036 470 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 MUM1L1Q5H9M0 696 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 BTNL9Q6UXG8 535 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 SLC39A5Q6ZMH5 540 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 KATNBL1Q9H079 304 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 ACAD9Q9H845 621 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
SSH3-209ENST00000532600 LTBP2Q14767 1821 aa22.34■■□□□ 1.17
SSH3-209ENST00000532600 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.17
SSH3-209ENST00000532600 SOWAHBA6NEL2 793 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 KBTBD13C9JR72 458 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 CCDC96Q2M329 555 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 TTC22Q5TAA0 569 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 RANBP17Q9H2T7 1088 aaKnown RBP22.33■■□□□ 1.17
SSH3-209ENST00000532600 PHF24Q9UPV7 400 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 CNPY2Q9Y2B0 182 aa22.33■■□□□ 1.17
SSH3-209ENST00000532600 DDX49Q9Y6V7 483 aaKnown RBP22.33■■□□□ 1.17
SSH3-209ENST00000532600 LRRC37A2A6NM11 1700 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 SNHG28P0DPA3 235 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 PDHBP11177 359 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
SSH3-209ENST00000532600 ALAS1P13196 640 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 IRX5P78411 483 aaPredicted RBP22.32■■□□□ 1.16
SSH3-209ENST00000532600 ZKSCAN3Q9BRR0 538 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 DSCC1Q9BVC3 393 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 GPCPD1Q9NPB8 672 aa22.32■■□□□ 1.16
SSH3-209ENST00000532600 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
SSH3-209ENST00000532600 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 HIP1O00291 1037 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 ZNF213O14771 459 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 ACVR2BQ13705 512 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 TKFCQ3LXA3 575 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 ARMCX2Q7L311 632 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 CCDC144CPQ8IYA2 1237 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 LRCH3Q96II8 777 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 TTC14Q96N46 770 aa22.31■■□□□ 1.16
SSH3-209ENST00000532600 MYADML2A6NDP7 307 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
SSH3-209ENST00000532600 TRIM60Q495X7 471 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 SYDE2Q5VT97 1194 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 CCSAPQ6IQ19 270 aaPredicted RBP22.3■■□□□ 1.16
SSH3-209ENST00000532600 KLHDC9Q8NEP7 349 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 PURBQ96QR8 312 aaKnown RBP22.3■■□□□ 1.16
SSH3-209ENST00000532600 RNF41Q9H4P4 317 aaPredicted RBP22.3■■□□□ 1.16
SSH3-209ENST00000532600 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 ATP11BQ9Y2G3 1177 aa22.3■■□□□ 1.16
SSH3-209ENST00000532600 POTEB2H3BUK9 544 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 KDM4AO75164 1064 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 ICAM1P05362 532 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 ZNF543Q08ER8 600 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 ESR2Q92731 530 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 CYP39A1Q9NYL5 469 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
SSH3-209ENST00000532600 A0A1W2PQ45 241 aaPredicted RBP22.28■■□□□ 1.16
SSH3-209ENST00000532600 A0A1W2PQY0 241 aa22.28■■□□□ 1.16
SSH3-209ENST00000532600 B4E1Z4 1266 aa22.28■■□□□ 1.16
SSH3-209ENST00000532600 CCDC144BQ3MJ40 725 aa22.28■■□□□ 1.16
SSH3-209ENST00000532600 C1orf53Q5VUE5 145 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms