RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 ME3Q16798 604 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 Q3C1V9 767 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 NFXL1Q6ZNB6 911 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 FASTKD5Q7L8L6 764 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 FBXL16Q8N461 479 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 SRBD1Q8N5C6 995 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 DCAF4Q8WV16 495 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 SHISA4Q96DD7 197 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 MTA3Q9BTC8 594 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 SH2D4AQ9H788 454 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 GOPCQ9HD26 462 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 RBPJLQ9UBG7 517 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 PPP1R9AQ9ULJ8 1098 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
TRIM49-202ENST00000532501 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
TRIM49-202ENST00000532501 NID2Q14112 1375 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 ZNF536O15090 1300 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 ZSWIM8A7E2V4 1837 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 GOLGA8AA7E2F4 631 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 FOXN1O15353 648 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 DDAH1O94760 285 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 CTDNEP1O95476 244 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 HMGB1P09429 215 aaKnown RBP9.33□□□□□ -0.92
TRIM49-202ENST00000532501 BCRP11274 1271 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 PTPN5P54829 565 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 IRX3P78415 501 aaPredicted RBP9.33□□□□□ -0.92
TRIM49-202ENST00000532501 STK3Q13188 491 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
TRIM49-202ENST00000532501 BTNL9Q6UXG8 535 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 PIBF1Q8WXW3 757 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 PORCNQ9H237 461 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 NAP1L2Q9ULW6 460 aaPredicted RBP9.33□□□□□ -0.92
TRIM49-202ENST00000532501 A0A0G2JMZ2 1700 aa9.33□□□□□ -0.92
TRIM49-202ENST00000532501 ERICH2A1L162 156 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 CCDC69A6NI79 296 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ZBTB43O43298 467 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 CA12O43570 354 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 SCRN1Q12765 414 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 RABEP1Q15276 862 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 NTRK3Q16288 839 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 CCDC178Q5BJE1 867 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 SYDE2Q5VT97 1194 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 C17orf99Q6UX52 265 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 LBX2Q6XYB7 198 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 CATIPQ7Z7H3 387 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 CCDC82Q8N4S0 544 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 SLF1Q9BQI6 1058 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ALDH8A1Q9H2A2 487 aaPredicted RBP9.32□□□□□ -0.92
TRIM49-202ENST00000532501 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 RAVER2Q9HCJ3 691 aaKnown RBP9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ZNF214Q9UL59 606 aaPredicted RBP9.32□□□□□ -0.92
TRIM49-202ENST00000532501 ADAMTS5Q9UNA0 930 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 RIPK3Q9Y572 518 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 SLC12A7Q9Y666 1083 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 BAZ2BQ9UIF8 2168 aaKnown RBP9.32□□□□□ -0.92
TRIM49-202ENST00000532501 PARP14Q460N5 1801 aa9.32□□□□□ -0.92
TRIM49-202ENST00000532501 VWA5AO00534 786 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 HRO43593 1189 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 TLR2O60603 784 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 JAK2O60674 1132 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PARP1P09874 1014 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 HSPA8P11142 646 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 RTN1Q16799 776 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 ASPRV1Q53RT3 343 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 ADGRF4Q8IZF3 695 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 FANCBQ8NB91 859 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 MTMR8Q96EF0 704 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 SLC38A10Q9HBR0 1119 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 SLC45A1Q9Y2W3 748 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PFKFB2O60825 505 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 METAP2P50579 478 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 STAT2P52630 851 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 INHBEP58166 350 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 FGD1P98174 961 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 IKQ13123 557 aaPredicted RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 COG2Q14746 738 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 QRICH1Q2TAL8 776 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 CCDC174Q6PII3 467 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PHKBQ93100 1093 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 AGBL1Q96MI9 1066 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms