RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 ACAD9Q9H845 621 aa26.92■■□□□ 1.9
PPP1CA-207ENST00000532279 RNF146Q9NTX7 359 aa26.92■■□□□ 1.9
PPP1CA-207ENST00000532279 TAL1P17542 331 aaPredicted RBP26.91■■□□□ 1.9
PPP1CA-207ENST00000532279 PTH1RQ03431 593 aa26.91■■□□□ 1.9
PPP1CA-207ENST00000532279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.91■■□□□ 1.9
PPP1CA-207ENST00000532279 COLQQ9Y215 455 aaPredicted RBP26.91■■□□□ 1.9
PPP1CA-207ENST00000532279 MYCNP04198 464 aaPredicted RBP26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 COL6A1P12109 1028 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 SYDE2Q5VT97 1194 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 DGKHQ86XP1 1220 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 TRERF1Q96PN7 1200 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 KRT23Q9C075 422 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 ZSWIM5Q9P217 1185 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 NRBP1Q9UHY1 535 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 CNPY2Q9Y2B0 182 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 CEP290O15078 2479 aa26.9■■□□□ 1.9
PPP1CA-207ENST00000532279 NT5C2P49902 561 aa26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 GJC2Q5T442 439 aaPredicted RBP26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 BTNL9Q6UXG8 535 aa26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 ZSCAN10Q96SZ4 725 aaPredicted RBP26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 CNNM2Q9H8M5 875 aa26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 CCPG1Q9ULG6 757 aa26.89■■□□□ 1.9
PPP1CA-207ENST00000532279 ZNF543Q08ER8 600 aa26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 TKFCQ3LXA3 575 aa26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 CCDC178Q5BJE1 867 aa26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 HABP4Q5JVS0 413 aaKnown RBP26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 CHRDL2Q6WN34 429 aa26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 CENPQQ7L2Z9 268 aaPredicted RBP26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 SKAP1Q86WV1 359 aa26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 SENP6Q9GZR1 1112 aaPredicted RBP26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 RANBP17Q9H2T7 1088 aaKnown RBP26.88■■□□□ 1.89
PPP1CA-207ENST00000532279 DNM1LO00429 736 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 SGSM2O43147 1006 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 ICAM1P05362 532 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 ZNF865P0CJ78 1059 aaPredicted RBP26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 CNTN2Q02246 1040 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 MUM1L1Q5H9M0 696 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 MSL3Q8N5Y2 521 aaKnown RBP26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 ARRDC4Q8NCT1 418 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 PNMA1Q8ND90 353 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 KAT14Q9H8E8 782 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 A1CFQ9NQ94 594 aaKnown RBP26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 TNKSO95271 1327 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 SYNGAP1Q96PV0 1343 aa26.87■■□□□ 1.89
PPP1CA-207ENST00000532279 SNAI1O95863 264 aaPredicted RBP26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 GOLGA8HP0CJ92 632 aa26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 SNHG28P0DPA3 235 aa26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 MAMDC4Q6UXC1 1216 aa26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 ZNF467Q7Z7K2 595 aaPredicted RBP26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 ENAHQ8N8S7 591 aaPredicted RBP26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 FGD4Q96M96 766 aa26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 UBAC1Q9BSL1 405 aa26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 ZHX1Q9UKY1 873 aaPredicted RBP26.86■■□□□ 1.89
PPP1CA-207ENST00000532279 KBTBD13C9JR72 458 aa26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 POTEB2H3BUK9 544 aa26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 RARBP10826 455 aa26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 LRRC26Q2I0M4 334 aa26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 ZMYND8Q9ULU4 1186 aaPredicted RBP26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 U3KPZ7 1027 aaPredicted RBP26.85■■□□□ 1.89
PPP1CA-207ENST00000532279 CYP21A2P08686 494 aa26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 AKR1A1P14550 325 aa26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 ANKS1AQ92625 1134 aa26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 LENG1Q96BZ8 264 aaPredicted RBP26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 XPNPEP3Q9NQH7 507 aa26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 LCTP09848 1927 aa26.84■■□□□ 1.89
PPP1CA-207ENST00000532279 ATN1P54259 1190 aaPredicted RBP26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 TRDNQ13061 729 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 LRRC41Q15345 812 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 GPATCH4Q5T3I0 446 aaKnown RBP26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 NSMFQ6X4W1 530 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 ARMCX2Q7L311 632 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 FAM133AQ8N9E0 248 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 CPVLQ9H3G5 476 aa26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.83■■□□□ 1.89
PPP1CA-207ENST00000532279 PGK1P00558 417 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 SYN1P17600 705 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 CYB5R4Q7L1T6 521 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 CCDC144CPQ8IYA2 1237 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 UBA5Q9GZZ9 404 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 MYH6P13533 1939 aa26.82■■□□□ 1.88
PPP1CA-207ENST00000532279 ACVR2BQ13705 512 aa26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 IFIT1BQ5T764 474 aaKnown RBP26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 CYP39A1Q9NYL5 469 aa26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 RBM27Q9P2N5 1060 aaKnown RBP26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 FAM184BQ9ULE4 1060 aa26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 TAF6LQ9Y6J9 622 aa26.81■■□□□ 1.88
PPP1CA-207ENST00000532279 SOWAHBA6NEL2 793 aa26.8■■□□□ 1.88
PPP1CA-207ENST00000532279 ABHD16BQ9H3Z7 469 aa26.8■■□□□ 1.88
PPP1CA-207ENST00000532279 NFIBO00712 420 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 ADCYAP1R1P41586 468 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 KIAA1211Q6ZU35 1233 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 RALYLQ86SE5 291 aaKnown RBP26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 MAP4K1Q92918 833 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 FERMT2Q96AC1 680 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 PURBQ96QR8 312 aaKnown RBP26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 PCDH10Q9P2E7 1040 aa26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 RBM8AQ9Y5S9 174 aaKnown RBP26.79■■□□□ 1.88
PPP1CA-207ENST00000532279 E7EWF7 191 aa26.78■■□□□ 1.88
PPP1CA-207ENST00000532279 PARP1P09874 1014 aaKnown RBP26.78■■□□□ 1.88
PPP1CA-207ENST00000532279 BAATQ14032 418 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms