RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 RCSD1Q6JBY9 416 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 KCTD1Q719H9 257 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 SMC5Q8IY18 1101 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 TSEN34Q9BSV6 310 aaKnown RBP19.91■□□□□ 0.78
CPSF1-207ENST00000531727 ACAD9Q9H845 621 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 HOMER2Q9NSB8 354 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.91■□□□□ 0.78
CPSF1-207ENST00000531727 ZNF536O15090 1300 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 SYNRGQ9UMZ2 1314 aa19.91■□□□□ 0.78
CPSF1-207ENST00000531727 TRIM6-TRIM34B2RNG4 842 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 HSPD1P10809 573 aaKnown RBP19.9■□□□□ 0.78
CPSF1-207ENST00000531727 NMIQ13287 307 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-207ENST00000531727 ACVR2BQ13705 512 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 TKFCQ3LXA3 575 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 DEFB123Q8N688 67 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 AGBL1Q96MI9 1066 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 RWDD1Q9H446 243 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-207ENST00000531727 RNF146Q9NTX7 359 aa19.9■□□□□ 0.78
CPSF1-207ENST00000531727 MCM3APO60318 1980 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 DUSP11O75319 330 aaKnown RBP19.89■□□□□ 0.77
CPSF1-207ENST00000531727 TLE2Q04725 743 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 ARMCX2Q7L311 632 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 RASGRP2Q7LDG7 609 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-207ENST00000531727 KLHDC9Q8NEP7 349 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 ABHD16BQ9H3Z7 469 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 PRR12Q9ULL5 1215 aa19.89■□□□□ 0.77
CPSF1-207ENST00000531727 CCDC171Q6TFL3 1326 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 TRIM43BA6NCK2 446 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 POTEB2H3BUK9 544 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 ACLYP53396 1101 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 CNTN2Q02246 1040 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 Q7L0L9 218 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 SH3RF1Q7Z6J0 888 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 CCDC144CPQ8IYA2 1237 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 FAM133AQ8N9E0 248 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 DCAF4Q8WV16 495 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 RILPL2Q969X0 211 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 TRIM43Q96BQ3 446 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-207ENST00000531727 TRERF1Q96PN7 1200 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 A1CFQ9NQ94 594 aaKnown RBP19.88■□□□□ 0.77
CPSF1-207ENST00000531727 TOMM22Q9NS69 142 aa19.88■□□□□ 0.77
CPSF1-207ENST00000531727 MOXD2PA6NHM9 499 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 ADCY6O43306 1168 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 ALAS1P13196 640 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 CST5P28325 142 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-207ENST00000531727 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
CPSF1-207ENST00000531727 CCSAPQ6IQ19 270 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-207ENST00000531727 CCDC174Q6PII3 467 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 CHD1LQ86WJ1 897 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 NUP133Q8WUM0 1156 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 BADQ92934 168 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 KATNBL1Q9H079 304 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 TCP11L1Q9NUJ3 509 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 MTMR7Q9Y216 660 aa19.87■□□□□ 0.77
CPSF1-207ENST00000531727 LRRC37A2A6NM11 1700 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 IGHDP01880 384 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 CLTBP09497 229 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 TOP1P11387 765 aaKnown RBP19.86■□□□□ 0.77
CPSF1-207ENST00000531727 SNAP25P60880 206 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 KCNA10Q16322 511 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 CCDC96Q2M329 555 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 TMEM47Q9BQJ4 181 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 UPF3AQ9H1J1 476 aaKnown RBP19.86■□□□□ 0.77
CPSF1-207ENST00000531727 OSBPL3Q9H4L5 887 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 SPC25Q9HBM1 224 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 STARD7Q9NQZ5 370 aa19.86■□□□□ 0.77
CPSF1-207ENST00000531727 MYADML2A6NDP7 307 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 SOWAHBA6NEL2 793 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 PQBP1O60828 265 aaKnown RBP19.85■□□□□ 0.77
CPSF1-207ENST00000531727 C6orf222P0C671 652 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-207ENST00000531727 PCP11498 1178 aaKnown RBP19.85■□□□□ 0.77
CPSF1-207ENST00000531727 SDSP20132 328 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 MFAP1P55081 439 aaKnown RBP19.85■□□□□ 0.77
CPSF1-207ENST00000531727 GJA9P57773 515 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 HAND2P61296 217 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 NUCB1Q02818 461 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 BTNL9Q6UXG8 535 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 PLEKHM2Q8IWE5 1019 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 RANBP17Q9H2T7 1088 aaKnown RBP19.85■□□□□ 0.77
CPSF1-207ENST00000531727 MTMR10Q9NXD2 777 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 CCPG1Q9ULG6 757 aa19.85■□□□□ 0.77
CPSF1-207ENST00000531727 ASB14A6NK59 587 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 KIAA0355O15063 1070 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 IRX5P78411 483 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-207ENST00000531727 SHHQ15465 462 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 MUM1L1Q5H9M0 696 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 AKNAD1Q5T1N1 836 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 TTBK2Q6IQ55 1244 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 ANKRD33Q7Z3H0 272 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 PCSK9Q8NBP7 692 aaKnown RBP19.84■□□□□ 0.77
CPSF1-207ENST00000531727 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 CYP39A1Q9NYL5 469 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 COL6A3P12111 3177 aa19.84■□□□□ 0.77
CPSF1-207ENST00000531727 LAMA4Q16363 1823 aa19.83■□□□□ 0.77
CPSF1-207ENST00000531727 ELP1O95163 1332 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms