RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 C1orf53Q5VUE5 145 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 KCTD1Q719H9 257 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 ZNF589Q86UQ0 364 aaPredicted RBP15.5■□□□□ 0.07
SF3B2-212ENST00000531589 TTC14Q96N46 770 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 ABHD16BQ9H3Z7 469 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 HOMER2Q9NSB8 354 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 DIAPH3Q9NSV4 1193 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 PHF24Q9UPV7 400 aa15.5■□□□□ 0.07
SF3B2-212ENST00000531589 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
SF3B2-212ENST00000531589 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
SF3B2-212ENST00000531589 TAL1P17542 331 aaPredicted RBP15.49■□□□□ 0.07
SF3B2-212ENST00000531589 SNX17Q15036 470 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 CCDC96Q2M329 555 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 LRIT3Q3SXY7 679 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 SPC25Q9HBM1 224 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
SF3B2-212ENST00000531589 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
SF3B2-212ENST00000531589 ZNF213O14771 459 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 PGK1P00558 417 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 ALAS1P13196 640 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
SF3B2-212ENST00000531589 ACVR2BQ13705 512 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 GPR153Q6NV75 609 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 ESR2Q92731 530 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 CHMP4CQ96CF2 233 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 TRERF1Q96PN7 1200 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
SF3B2-212ENST00000531589 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.48■□□□□ 0.07
SF3B2-212ENST00000531589 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
SF3B2-212ENST00000531589 ZNF536O15090 1300 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 ASB14A6NK59 587 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
SF3B2-212ENST00000531589 RANBP2P49792 3224 aaKnown RBP15.47■□□□□ 0.07
SF3B2-212ENST00000531589 HAND2P61296 217 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 CCDC178Q5BJE1 867 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 CWC27Q6UX04 472 aaKnown RBP15.47■□□□□ 0.07
SF3B2-212ENST00000531589 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 TACC3Q9Y6A5 838 aa15.47■□□□□ 0.07
SF3B2-212ENST00000531589 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 MOXD2PA6NHM9 499 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 ADAMTS4O75173 837 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 ICAM1P05362 532 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 TRIM60Q495X7 471 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 ARMCX2Q7L311 632 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 CCDC144CPQ8IYA2 1237 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 FAM133AQ8N9E0 248 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 PCSK9Q8NBP7 692 aaKnown RBP15.46■□□□□ 0.07
SF3B2-212ENST00000531589 A1CFQ9NQ94 594 aaKnown RBP15.46■□□□□ 0.07
SF3B2-212ENST00000531589 PRDM5Q9NQX1 630 aaPredicted RBP15.46■□□□□ 0.07
SF3B2-212ENST00000531589 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
SF3B2-212ENST00000531589 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.07
SF3B2-212ENST00000531589 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
SF3B2-212ENST00000531589 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 SOX1O00570 391 aaPredicted RBP15.45■□□□□ 0.06
SF3B2-212ENST00000531589 ACLYP53396 1101 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 CCDC144BQ3MJ40 725 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 SYDE2Q5VT97 1194 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 IQCA1Q86XH1 822 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 LRCH3Q96II8 777 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
SF3B2-212ENST00000531589 STARD7Q9NQZ5 370 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 CTNNA3Q9UI47 895 aa15.45■□□□□ 0.06
SF3B2-212ENST00000531589 C6orf222P0C671 652 aaPredicted RBP15.44■□□□□ 0.06
SF3B2-212ENST00000531589 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
SF3B2-212ENST00000531589 CNTN2Q02246 1040 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 TLE2Q04725 743 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 IMMTQ16891 758 aaKnown RBP15.44■□□□□ 0.06
SF3B2-212ENST00000531589 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 KLHDC9Q8NEP7 349 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 GLT1D1Q96MS3 346 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 DSCC1Q9BVC3 393 aa15.44■□□□□ 0.06
SF3B2-212ENST00000531589 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
SF3B2-212ENST00000531589 DCDC2CA8MYV0 355 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 CLTBP09497 229 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 PDHBP11177 359 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 SLC16A2P36021 539 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 GJA9P57773 515 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 SNAP25P60880 206 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 KCNA10Q16322 511 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 GPATCH4Q5T3I0 446 aaKnown RBP15.43■□□□□ 0.06
SF3B2-212ENST00000531589 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 TBC1D10CQ8IV04 446 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 LENG1Q96BZ8 264 aaPredicted RBP15.43■□□□□ 0.06
SF3B2-212ENST00000531589 FGD4Q96M96 766 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 TOX2Q96NM4 488 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 PDLIM7Q9NR12 457 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 ELP1O95163 1332 aa15.43■□□□□ 0.06
SF3B2-212ENST00000531589 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms