RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 PPP1R12CQ9BZL4 782 aa21.56■■□□□ 1.04
SCN4B-205ENST00000531550 PUS7LQ9H0K6 701 aaKnown RBP21.56■■□□□ 1.04
SCN4B-205ENST00000531550 PRDM12Q9H4Q4 367 aa21.56■■□□□ 1.04
SCN4B-205ENST00000531550 SPC25Q9HBM1 224 aa21.56■■□□□ 1.04
SCN4B-205ENST00000531550 NYAP2Q9P242 653 aa21.56■■□□□ 1.04
SCN4B-205ENST00000531550 TTC28Q96AY4 2481 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 F5H6K3 240 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 ACRP10323 421 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 COL9A1P20849 921 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 KLRC3Q07444 240 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 CCDC144BQ3MJ40 725 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 AKNAD1Q5T1N1 836 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 PSRC1Q6PGN9 363 aaPredicted RBP21.55■■□□□ 1.04
SCN4B-205ENST00000531550 FAM126BQ8IXS8 530 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
SCN4B-205ENST00000531550 ABHD16BQ9H3Z7 469 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 MCM3APO60318 1980 aa21.55■■□□□ 1.04
SCN4B-205ENST00000531550 ZBED4O75132 1171 aa21.54■■□□□ 1.04
SCN4B-205ENST00000531550 ZNF365Q70YC5 407 aa21.54■■□□□ 1.04
SCN4B-205ENST00000531550 ARMCX2Q7L311 632 aa21.54■■□□□ 1.04
SCN4B-205ENST00000531550 RAVER2Q9HCJ3 691 aaKnown RBP21.54■■□□□ 1.04
SCN4B-205ENST00000531550 THEGQ9P2T0 379 aa21.54■■□□□ 1.04
SCN4B-205ENST00000531550 CTDP1Q9Y5B0 961 aaPredicted RBP21.54■■□□□ 1.04
SCN4B-205ENST00000531550 CHD9Q3L8U1 2897 aa21.54■■□□□ 1.04
SCN4B-205ENST00000531550 MYH4Q9Y623 1939 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 TLR3O15455 904 aaKnown RBP21.53■■□□□ 1.04
SCN4B-205ENST00000531550 HDAC1Q13547 482 aaPredicted RBP21.53■■□□□ 1.04
SCN4B-205ENST00000531550 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 GNASQ5JWF2 1037 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 ZSCAN25Q6NSZ9 544 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 STK11IPQ8N1F8 1099 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 ANKRD35Q8N283 1001 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 KIFC2Q96AC6 838 aa21.53■■□□□ 1.04
SCN4B-205ENST00000531550 CTAGE5O15320 804 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 ADGRE1Q14246 886 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 RAB30Q15771 203 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 ASB2Q96Q27 587 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 KATNBL1Q9H079 304 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
SCN4B-205ENST00000531550 MKNK2Q9HBH9 465 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 SLC38A10Q9HBR0 1119 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 IL23AQ9NPF7 189 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 FBXO40Q9UH90 709 aa21.52■■□□□ 1.04
SCN4B-205ENST00000531550 IGKV6D-41A0A0C4DH26 115 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 CD4P01730 458 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 CYP2C18P33260 490 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 NKX3-2P78367 333 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 B4GALNT3Q6L9W6 998 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 CCDC144CPQ8IYA2 1237 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 CHST13Q8NET6 341 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 HERVK_113Q902F9 699 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 STRBPQ96SI9 672 aaKnown RBP21.51■■□□□ 1.03
SCN4B-205ENST00000531550 CLIP2Q9UDT6 1046 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 GBF1Q92538 1859 aa21.51■■□□□ 1.03
SCN4B-205ENST00000531550 LRRC37A2A6NM11 1700 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 GSG1L2A8MUP6 293 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 OAZ1P54368 228 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 ADAMTS19Q8TE59 1207 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 CXXC1Q9P0U4 656 aaPredicted RBP21.5■■□□□ 1.03
SCN4B-205ENST00000531550 MSRAQ9UJ68 235 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 FEM1BQ9UK73 627 aa21.5■■□□□ 1.03
SCN4B-205ENST00000531550 MINDY4BA8MYZ0 360 aa21.49■■□□□ 1.03
SCN4B-205ENST00000531550 BEX3Q00994 111 aa21.49■■□□□ 1.03
SCN4B-205ENST00000531550 CCDC85BQ15834 202 aaPredicted RBP21.49■■□□□ 1.03
SCN4B-205ENST00000531550 GIMAP6Q6P9H5 292 aa21.49■■□□□ 1.03
SCN4B-205ENST00000531550 NKX2-4Q9H2Z4 354 aa21.49■■□□□ 1.03
SCN4B-205ENST00000531550 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.48■■□□□ 1.03
SCN4B-205ENST00000531550 IGFBP4P22692 258 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 MRPS5P82675 430 aaKnown RBP21.48■■□□□ 1.03
SCN4B-205ENST00000531550 CNTN2Q02246 1040 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 SLC43A3Q8NBI5 491 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 CEP95Q96GE4 821 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 MTIF3Q9H2K0 278 aaKnown RBP21.48■■□□□ 1.03
SCN4B-205ENST00000531550 HIPK3Q9H422 1215 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 HOMER2Q9NSB8 354 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 YBX2Q9Y2T7 364 aaKnown RBP21.48■■□□□ 1.03
SCN4B-205ENST00000531550 ASTN1O14525 1302 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 UMODL1Q5DID0 1318 aa21.48■■□□□ 1.03
SCN4B-205ENST00000531550 IGHDP01880 384 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 FGBP02675 491 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 TNFAIP2Q03169 654 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 CXCL17Q6UXB2 119 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 LRRC47Q8N1G4 583 aaKnown RBP21.47■■□□□ 1.03
SCN4B-205ENST00000531550 GMCL1P1Q8NEA9 526 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 MKL1Q969V6 931 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 RAPGEFL1Q9UHV5 662 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 SYNPO2Q9UMS6 1093 aa21.47■■□□□ 1.03
SCN4B-205ENST00000531550 CHD7Q9P2D1 2997 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 NOL8Q76FK4 1167 aaKnown RBP21.46■■□□□ 1.03
SCN4B-205ENST00000531550 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
SCN4B-205ENST00000531550 TLK2Q86UE8 772 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 FAM133AQ8N9E0 248 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 UHRF1Q96T88 793 aaPredicted RBP21.46■■□□□ 1.03
SCN4B-205ENST00000531550 ACAD9Q9H845 621 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 SLC28A3Q9HAS3 691 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 EPB41L4AQ9HCS5 686 aaPredicted RBP21.46■■□□□ 1.03
SCN4B-205ENST00000531550 MTMR4Q9NYA4 1195 aa21.46■■□□□ 1.03
SCN4B-205ENST00000531550 GNEQ9Y223 722 aaKnown RBP21.46■■□□□ 1.03
SCN4B-205ENST00000531550 PRDM1O75626 825 aa21.45■■□□□ 1.02
SCN4B-205ENST00000531550 CABYRO75952 493 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms