RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 STX8Q9UNK0 236 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 FGAP02671 866 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 MCCP23508 829 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 NT5C2P49902 561 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 ACLYP53396 1101 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 TLE2Q04725 743 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 CTDSPL2Q05D32 466 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 UPF3AQ9H1J1 476 aaKnown RBP15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 OSBPL3Q9H4L5 887 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
AMBRA1-210ENST00000531542 ELP1O95163 1332 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 GJA9P57773 515 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 BTNL9Q6UXG8 535 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 DCAF4Q8WV16 495 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 KATNBL1Q9H079 304 aa15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 RWDD1Q9H446 243 aaPredicted RBP15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 A1CFQ9NQ94 594 aaKnown RBP15.76■□□□□ 0.11
AMBRA1-210ENST00000531542 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 ASB14A6NK59 587 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 NMT2O60551 498 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 CLTBP09497 229 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 HSPD1P10809 573 aaKnown RBP15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 CCDC144BQ3MJ40 725 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 ARMCX2Q7L311 632 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 SH3RF1Q7Z6J0 888 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 PCSK9Q8NBP7 692 aaKnown RBP15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 BADQ92934 168 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 AGBL1Q96MI9 1066 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 TTC14Q96N46 770 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 INCENPQ9NQS7 918 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 RNF146Q9NTX7 359 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 ZHX1Q9UKY1 873 aaPredicted RBP15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 PRR12Q9ULL5 1215 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 SMCHD1A6NHR9 2005 aa15.75■□□□□ 0.11
AMBRA1-210ENST00000531542 PLXNA1Q9UIW2 1896 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 A0A0D9SFI3 127 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 TOP1P11387 765 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 CDK7P50613 346 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 MFAP1P55081 439 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 IKQ13123 557 aaPredicted RBP15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 PWP2Q15269 919 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 KCNA10Q16322 511 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 CCDC144CPQ8IYA2 1237 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 LENG1Q96BZ8 264 aaPredicted RBP15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 PNMA2Q9UL42 364 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 COL6A3P12111 3177 aa15.74■□□□□ 0.11
AMBRA1-210ENST00000531542 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 DCDC2CA8MYV0 355 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 ICAM1P05362 532 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 CNTN2Q02246 1040 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 FAAP100Q0VG06 881 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 SHHQ15465 462 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 KCTD1Q719H9 257 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 Q7L0L9 218 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 MORC4Q8TE76 937 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 GLT1D1Q96MS3 346 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 SEZ6LQ9BYH1 1024 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 RANBP17Q9H2T7 1088 aaKnown RBP15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 HOMER2Q9NSB8 354 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 LTBP2Q14767 1821 aa15.73■□□□□ 0.11
AMBRA1-210ENST00000531542 CCDC171Q6TFL3 1326 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 CTAGE5O15320 804 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 ADCY6O43306 1168 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 ITGB8P26012 769 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 SMAD3P84022 425 aaKnown RBP15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 NUCB1Q02818 461 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 NMIQ13287 307 aaPredicted RBP15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 AKNAD1Q5T1N1 836 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 ZNF589Q86UQ0 364 aaPredicted RBP15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 TMEM47Q9BQJ4 181 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 TMEM39AQ9NV64 488 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 CYP39A1Q9NYL5 469 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 Q9Y3F1 56 aa15.72■□□□□ 0.11
AMBRA1-210ENST00000531542 MYADML2A6NDP7 307 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 PQBP1O60828 265 aaKnown RBP15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 ASGR1P07306 291 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 C6orf222P0C671 652 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 ALAS1P13196 640 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 RAG1P15918 1043 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 SDSP20132 328 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms