RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-205ENST00000531104 IL17AQ16552 155 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-205ENST00000531104 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 SASS6Q6UVJ0 657 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 GPC2Q8N158 579 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 ACER1Q8TDN7 264 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 COA7Q96BR5 231 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 PDLIM2Q96JY6 352 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 HACL1Q9UJ83 578 aa12.46□□□□□ -0.41
SRPRA-205ENST00000531104 H7C1D1 291 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 EDIL3O43854 480 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 PRPHP41219 470 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 ECE1P42892 770 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 MDM2Q00987 491 aaPredicted RBP12.45□□□□□ -0.42
SRPRA-205ENST00000531104 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 NONOQ15233 471 aaKnown RBP eCLIP12.45□□□□□ -0.42
SRPRA-205ENST00000531104 INF2Q27J81 1249 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 QRICH1Q2TAL8 776 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 MIGA2Q7L4E1 593 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 FAM200AQ8TCP9 573 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 GLT8D2Q9H1C3 349 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 ZNF112Q9UJU3 913 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 ATAD5Q96QE3 1844 aa12.45□□□□□ -0.42
SRPRA-205ENST00000531104 LAD1O00515 517 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 ASNSP08243 561 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 MCM7P33993 719 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 STX1AQ16623 288 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 USP49Q70CQ1 688 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 APOBEC3FQ8IUX4 373 aaKnown RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
SRPRA-205ENST00000531104 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 GOPCQ9HD26 462 aa12.44□□□□□ -0.42
SRPRA-205ENST00000531104 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
SRPRA-205ENST00000531104 LONP1P36776 959 aaKnown RBP12.43□□□□□ -0.42
SRPRA-205ENST00000531104 MRPL12P52815 198 aaKnown RBP12.43□□□□□ -0.42
SRPRA-205ENST00000531104 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 NEK8Q86SG6 692 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 SH2D4AQ9H788 454 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 CBX8Q9HC52 389 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 ANO10Q9NW15 660 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
SRPRA-205ENST00000531104 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
SRPRA-205ENST00000531104 A0A087X0B3 334 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 HIRAP54198 1017 aaPredicted RBP12.42□□□□□ -0.42
SRPRA-205ENST00000531104 IQCB1Q15051 598 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 TBCKQ8TEA7 893 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 SYMPKQ92797 1274 aaKnown RBP12.42□□□□□ -0.42
SRPRA-205ENST00000531104 CUL5Q93034 780 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
SRPRA-205ENST00000531104 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
SRPRA-205ENST00000531104 SCAF8Q9UPN6 1271 aaKnown RBP12.42□□□□□ -0.42
SRPRA-205ENST00000531104 PITPNM2Q9BZ72 1349 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 POLR2DO15514 142 aaKnown RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 YBX3P16989 372 aaKnown RBP eCLIP12.41□□□□□ -0.426e-6■□□□□ 10.9
SRPRA-205ENST00000531104 EPS15P42566 896 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 STAT2P52630 851 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 NLRP12P59046 1061 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 E2F4Q16254 413 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 FAM83BQ5T0W9 1011 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 ANGEL2Q5VTE6 544 aaKnown RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 MCTP2Q6DN12 878 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 KANK3Q6NY19 840 aa12.41□□□□□ -0.42
SRPRA-205ENST00000531104 C11orf57Q6ZUT1 292 aaPredicted RBP12.41□□□□□ -0.42
SRPRA-205ENST00000531104 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms