RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 BEX3Q00994 111 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 TMEM240Q5SV17 173 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 GIMAP6Q6P9H5 292 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 ZNF467Q7Z7K2 595 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 MKL1Q969V6 931 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 SEC62Q99442 399 aaKnown RBP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 ASTN1O14525 1302 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 GBF1Q92538 1859 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 TMEM265A0A087WTH1 108 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.87■□□□□ 0.13
HIF3A-214ENST00000531043 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.87■□□□□ 0.13
HIF3A-214ENST00000531043 CSF2RAP15509 400 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 TDO2P48775 406 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 GJA9P57773 515 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 SNAP25P60880 206 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 MFSD5Q6N075 450 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 RASGRP2Q7LDG7 609 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 ANKRD35Q8N283 1001 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 TIFAQ96CG3 184 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 ZNF576Q9H609 170 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 FEM1BQ9UK73 627 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 ELP1O95163 1332 aa15.87■□□□□ 0.13
HIF3A-214ENST00000531043 LCTP09848 1927 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 ARVCFO00192 962 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 TMEM63BQ5T3F8 832 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 RASIP1Q5U651 963 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 FAM126BQ8IXS8 530 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 ZNF444Q8N0Y2 327 aaPredicted RBP15.86■□□□□ 0.13
HIF3A-214ENST00000531043 VTI1AQ96AJ9 217 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 AGBL1Q96MI9 1066 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 GLT1D1Q96MS3 346 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 PPP1R12CQ9BZL4 782 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 ABHD16BQ9H3Z7 469 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 INCENPQ9NQS7 918 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 ZNF536O15090 1300 aa15.86■□□□□ 0.13
HIF3A-214ENST00000531043 SOWAHBA6NEL2 793 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 TTLL1O95922 423 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 APPP05067 770 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 CYP2C18P33260 490 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
HIF3A-214ENST00000531043 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 IFNL3Q8IZI9 196 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 FAM133AQ8N9E0 248 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 GMCL1P1Q8NEA9 526 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 CHST13Q8NET6 341 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 OTUD7AQ8TE49 926 aaPredicted RBP15.85■□□□□ 0.13
HIF3A-214ENST00000531043 PBX4Q9BYU1 374 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 CTDP1Q9Y5B0 961 aaPredicted RBP15.85■□□□□ 0.13
HIF3A-214ENST00000531043 UMODL1Q5DID0 1318 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
HIF3A-214ENST00000531043 MUC3AQ02505 3323 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 PATL2C9JE40 543 aaKnown RBP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 TMEM232C9JQI7 657 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 CD4P01730 458 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 BMP3P12645 472 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 PPIGQ13427 754 aaKnown RBP eCLIP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 NEDD1Q8NHV4 660 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 DCTPP1Q9H773 170 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 A1CFQ9NQ94 594 aaKnown RBP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 CXXC1Q9P0U4 656 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-214ENST00000531043 GRIN2DO15399 1336 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 PLIN4Q96Q06 1357 aa15.84■□□□□ 0.13
HIF3A-214ENST00000531043 FOXP2O15409 715 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 OAZ1P54368 228 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 NKX3-2P78367 333 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 TFAP4Q01664 338 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 PURBQ96QR8 312 aaKnown RBP15.83■□□□□ 0.12
HIF3A-214ENST00000531043 PRDM12Q9H4Q4 367 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 PDGFCQ9NRA1 345 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 RNF146Q9NTX7 359 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 FBXO40Q9UH90 709 aa15.83■□□□□ 0.12
HIF3A-214ENST00000531043 ISY1Q9ULR0 285 aaKnown RBP15.83■□□□□ 0.12
HIF3A-214ENST00000531043 GNEQ9Y223 722 aaKnown RBP15.83■□□□□ 0.12
HIF3A-214ENST00000531043 REV3LO60673 3130 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 NMT2O60551 498 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 ZFYP08048 801 aaPredicted RBP15.82■□□□□ 0.12
HIF3A-214ENST00000531043 TSPY3P0CV98 308 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 TSPY8P0CW00 308 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 SMPD1P17405 629 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 GNAT2P19087 354 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 MCCP23508 829 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 TNFAIP2Q03169 654 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 ADGRE1Q14246 886 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 MUM1L1Q5H9M0 696 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
HIF3A-214ENST00000531043 NOL8Q76FK4 1167 aaKnown RBP15.82■□□□□ 0.12
HIF3A-214ENST00000531043 CHMP4BQ9H444 224 aaKnown RBP15.82■□□□□ 0.12
HIF3A-214ENST00000531043 ACAD9Q9H845 621 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms