RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TMEM87AQ8NBN3 555 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-228ENST00000531007 LPAR1Q92633 364 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 GLT8D2Q9H1C3 349 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
CTNND1-228ENST00000531007 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-228ENST00000531007 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
CTNND1-228ENST00000531007 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 F5H6K3 240 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 MMP1P03956 469 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■□□□ 13.6
CTNND1-228ENST00000531007 SLC1A4P43007 532 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 ATP2B2Q01814 1243 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 KLRC3Q07444 240 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 RESTQ13127 1097 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 GNL2Q13823 731 aaKnown RBP11.36□□□□□ -0.59
CTNND1-228ENST00000531007 PKN1Q16512 942 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
CTNND1-228ENST00000531007 KRT40Q6A162 431 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 MIGA2Q7L4E1 593 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 SIAH1Q8IUQ4 282 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 SCYL3Q8IZE3 742 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 LRRC47Q8N1G4 583 aaKnown RBP11.36□□□□□ -0.59
CTNND1-228ENST00000531007 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
CTNND1-228ENST00000531007 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 MYH4Q9Y623 1939 aa11.36□□□□□ -0.59
CTNND1-228ENST00000531007 ELP1O95163 1332 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 NCLP19338 710 aaKnown RBP11.35□□□□□ -0.59
CTNND1-228ENST00000531007 KIF23Q02241 960 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-228ENST00000531007 NBPF12Q5TAG4 269 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-228ENST00000531007 MCTP2Q6DN12 878 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 STAG2Q8N3U4 1231 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 TATDN2Q93075 761 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
CTNND1-228ENST00000531007 ASTN2O75129 1339 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-228ENST00000531007 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 ESYT2A0FGR8 921 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 C19orf81C9J6K1 198 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 FDX1P10109 184 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 BMP3P12645 472 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 GNA11P29992 359 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 KRT2P35908 639 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 IREB2P48200 963 aaKnown RBP11.34□□□□□ -0.59
CTNND1-228ENST00000531007 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
CTNND1-228ENST00000531007 CCDC96Q2M329 555 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 BICD2Q8TD16 824 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-228ENST00000531007 MYH6P13533 1939 aa11.34□□□□□ -0.59
CTNND1-228ENST00000531007 SMAPO00193 183 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 ZBTB5O15062 677 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 CYTH3O43739 400 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 MBD3O95983 291 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 NDUFB10O96000 172 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 TRAPPC10P48553 1259 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 PTGDRQ13258 359 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 MAP3K11Q16584 847 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 WRNIP1Q96S55 665 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
CTNND1-228ENST00000531007 MORC2Q9Y6X9 1032 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-228ENST00000531007 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 A0A1W2PRG0 241 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 YEATS4O95619 227 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 BMP15O95972 392 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 STAT2P52630 851 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 NLRP5P59047 1200 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 JAG1P78504 1218 aa11.32□□□□□ -0.6
CTNND1-228ENST00000531007 DNM1Q05193 864 aaKnown RBP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-228ENST00000531007 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms